Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
AP3S1Q92572 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.8□□□□□ -0.52
AP3S1Q92572 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.8□□□□□ -0.52
AP3S1Q92572 TSPY16P-201ENST00000449843 468 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 AP001889.1-201ENST00000525414 633 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.8□□□□□ -0.52
AP3S1Q92572 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.8□□□□□ -0.52
AP3S1Q92572 C2orf69P2-201ENST00000562032 1123 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 AL671883.3-201ENST00000603274 991 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.8□□□□□ -0.52
AP3S1Q92572 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 AC008158.1-201ENST00000578759 3668 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 AC006037.2-201ENST00000622975 2232 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 AL513497.1-201ENST00000624273 2083 ntBASIC11.8□□□□□ -0.52
AP3S1Q92572 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
AP3S1Q92572 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
AP3S1Q92572 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
AP3S1Q92572 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 AL590483.3-201ENST00000623669 3580 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 BRD7P5-201ENST00000299197 1822 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 KRT8P43-201ENST00000406052 1458 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 AC005229.1-201ENST00000392885 409 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 PIN1P1-201ENST00000412108 996 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 SPTLC1P1-201ENST00000447199 261 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 COQ10BP2-201ENST00000513804 724 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.79□□□□□ -0.52
AP3S1Q92572 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.79□□□□□ -0.52
AP3S1Q92572 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 AC068338.3-201ENST00000617892 418 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.79□□□□□ -0.52
AP3S1Q92572 AC092299.1-201ENST00000632679 757 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 FAM47DP-201ENST00000402340 3290 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.79□□□□□ -0.52
AP3S1Q92572 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 AP003108.3-201ENST00000623765 2234 ntBASIC11.79□□□□□ -0.52
AP3S1Q92572 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.79□□□□□ -0.52
AP3S1Q92572 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP3S1Q92572 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC11.79□□□□□ -0.52
AP3S1Q92572 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC11.78□□□□□ -0.52
AP3S1Q92572 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP3S1Q92572 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms