RNA–Protein interactions for RNA: ENST00000533735.1

RAET1K-202, Transcript of retinoic acid early transcript 1K pseudogene, humanhuman

TSL 1 (best) BASIC

Gene RAET1K, Length 1,883 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1K-202ENST00000533735 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
RAET1K-202ENST00000533735 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
RAET1K-202ENST00000533735 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
RAET1K-202ENST00000533735 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
RAET1K-202ENST00000533735 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
RAET1K-202ENST00000533735 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
RAET1K-202ENST00000533735 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
RAET1K-202ENST00000533735 HRCP23327 699 aa20.45■□□□□ 0.86
RAET1K-202ENST00000533735 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
RAET1K-202ENST00000533735 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
RAET1K-202ENST00000533735 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
RAET1K-202ENST00000533735 ABCC9O60706 1549 aa19.92■□□□□ 0.78
RAET1K-202ENST00000533735 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
RAET1K-202ENST00000533735 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
RAET1K-202ENST00000533735 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
RAET1K-202ENST00000533735 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
RAET1K-202ENST00000533735 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
RAET1K-202ENST00000533735 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
RAET1K-202ENST00000533735 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
RAET1K-202ENST00000533735 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
RAET1K-202ENST00000533735 NACADO15069 1562 aa19.38■□□□□ 0.69
RAET1K-202ENST00000533735 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
RAET1K-202ENST00000533735 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
RAET1K-202ENST00000533735 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
RAET1K-202ENST00000533735 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
RAET1K-202ENST00000533735 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
RAET1K-202ENST00000533735 WIZO95785 1651 aa19.11■□□□□ 0.65
RAET1K-202ENST00000533735 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
RAET1K-202ENST00000533735 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
RAET1K-202ENST00000533735 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
RAET1K-202ENST00000533735 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
RAET1K-202ENST00000533735 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
RAET1K-202ENST00000533735 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
RAET1K-202ENST00000533735 EEA1Q15075 1411 aa18.85■□□□□ 0.61
RAET1K-202ENST00000533735 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
RAET1K-202ENST00000533735 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
RAET1K-202ENST00000533735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
RAET1K-202ENST00000533735 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
RAET1K-202ENST00000533735 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
RAET1K-202ENST00000533735 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
RAET1K-202ENST00000533735 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
RAET1K-202ENST00000533735 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
RAET1K-202ENST00000533735 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
RAET1K-202ENST00000533735 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
RAET1K-202ENST00000533735 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
RAET1K-202ENST00000533735 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
RAET1K-202ENST00000533735 SOGA1O94964 1423 aa18.62■□□□□ 0.57
RAET1K-202ENST00000533735 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
RAET1K-202ENST00000533735 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
RAET1K-202ENST00000533735 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.56
RAET1K-202ENST00000533735 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.55
RAET1K-202ENST00000533735 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.55
RAET1K-202ENST00000533735 KIF21BO75037 1637 aa18.51■□□□□ 0.55
RAET1K-202ENST00000533735 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
RAET1K-202ENST00000533735 MYT1Q01538 1121 aa18.47■□□□□ 0.55
RAET1K-202ENST00000533735 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
RAET1K-202ENST00000533735 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
RAET1K-202ENST00000533735 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
RAET1K-202ENST00000533735 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
RAET1K-202ENST00000533735 CLIP1P30622 1438 aa18.37■□□□□ 0.53
RAET1K-202ENST00000533735 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
RAET1K-202ENST00000533735 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
RAET1K-202ENST00000533735 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
RAET1K-202ENST00000533735 APLP2Q06481 763 aa18.29■□□□□ 0.52
RAET1K-202ENST00000533735 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
RAET1K-202ENST00000533735 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
RAET1K-202ENST00000533735 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
RAET1K-202ENST00000533735 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
RAET1K-202ENST00000533735 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
RAET1K-202ENST00000533735 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
RAET1K-202ENST00000533735 MIER1Q8N108 512 aa18.18■□□□□ 0.5
RAET1K-202ENST00000533735 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
RAET1K-202ENST00000533735 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
RAET1K-202ENST00000533735 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
RAET1K-202ENST00000533735 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
RAET1K-202ENST00000533735 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
RAET1K-202ENST00000533735 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
RAET1K-202ENST00000533735 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
RAET1K-202ENST00000533735 CUX2O14529 1486 aa17.99■□□□□ 0.47
RAET1K-202ENST00000533735 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
RAET1K-202ENST00000533735 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
RAET1K-202ENST00000533735 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
RAET1K-202ENST00000533735 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
RAET1K-202ENST00000533735 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
RAET1K-202ENST00000533735 CUX1P39880 1505 aa17.87■□□□□ 0.45
RAET1K-202ENST00000533735 MAP3K1Q13233 1512 aa17.86■□□□□ 0.45
RAET1K-202ENST00000533735 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
RAET1K-202ENST00000533735 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
RAET1K-202ENST00000533735 CFTRP13569 1480 aa17.79■□□□□ 0.44
RAET1K-202ENST00000533735 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
RAET1K-202ENST00000533735 SUPT16HQ9Y5B9 1047 aaKnown RBP17.76■□□□□ 0.43
RAET1K-202ENST00000533735 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
RAET1K-202ENST00000533735 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
RAET1K-202ENST00000533735 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
RAET1K-202ENST00000533735 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
RAET1K-202ENST00000533735 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
RAET1K-202ENST00000533735 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
RAET1K-202ENST00000533735 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
RAET1K-202ENST00000533735 IGF1RP08069 1367 aa17.64■□□□□ 0.41
RAET1K-202ENST00000533735 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms