Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHL1O00533 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHL1O00533 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHL1O00533 CACYBPP3-201ENST00000406011 625 ntBASIC16.91■□□□□ 0.3
CHL1O00533 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 AP000346.2-202ENST00000425948 383 ntBASIC16.91■□□□□ 0.3
CHL1O00533 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC16.91■□□□□ 0.3
CHL1O00533 FDPSP7-201ENST00000429043 1054 ntBASIC16.91■□□□□ 0.3
CHL1O00533 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 AC092865.2-201ENST00000439409 971 ntBASIC16.91■□□□□ 0.3
CHL1O00533 AP000343.1-201ENST00000440602 385 ntBASIC16.91■□□□□ 0.3
CHL1O00533 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 P2RX6P-202ENST00000450626 357 ntBASIC16.91■□□□□ 0.3
CHL1O00533 AC004923.3-201ENST00000527532 355 ntBASIC16.91■□□□□ 0.3
CHL1O00533 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC16.91■□□□□ 0.3
CHL1O00533 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC16.91■□□□□ 0.3
CHL1O00533 RN7SL524P-201ENST00000581152 300 ntBASIC16.91■□□□□ 0.3
CHL1O00533 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC16.91■□□□□ 0.3
CHL1O00533 AC009041.4-201ENST00000620075 638 ntBASIC16.91■□□□□ 0.3
CHL1O00533 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 MEX3B-202ENST00000558133 4333 ntBASIC16.91■□□□□ 0.3
CHL1O00533 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC16.91■□□□□ 0.3
CHL1O00533 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CHL1O00533 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHL1O00533 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHL1O00533 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CHL1O00533 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 ACTBP7-201ENST00000418351 1124 ntBASIC16.9■□□□□ 0.3
CHL1O00533 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC16.9■□□□□ 0.3
CHL1O00533 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC16.9■□□□□ 0.3
CHL1O00533 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.9■□□□□ 0.3
CHL1O00533 RN7SL646P-201ENST00000492969 297 ntBASIC16.9■□□□□ 0.3
CHL1O00533 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC16.9■□□□□ 0.3
CHL1O00533 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.9■□□□□ 0.3
CHL1O00533 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 EIF5AP2-201ENST00000585668 1047 ntBASIC16.9■□□□□ 0.3
CHL1O00533 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CHL1O00533 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.9■□□□□ 0.3
CHL1O00533 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
CHL1O00533 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHL1O00533 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHL1O00533 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
CHL1O00533 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHL1O00533 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms