Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSR1P43307 OR2K2-202ENST00000374428 1038 ntBASIC14.41□□□□□ -0.1
SSR1P43307 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 TUBB2BP1-201ENST00000404155 871 ntBASIC14.41□□□□□ -0.1
SSR1P43307 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.41□□□□□ -0.1
SSR1P43307 PDIA3P2-201ENST00000428073 158 ntBASIC14.41□□□□□ -0.1
SSR1P43307 AC005077.2-201ENST00000449786 690 ntBASIC14.41□□□□□ -0.1
SSR1P43307 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 RTN3P1-201ENST00000536295 711 ntBASIC14.41□□□□□ -0.1
SSR1P43307 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.41□□□□□ -0.1
SSR1P43307 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SSR1P43307 AL161670.2-201ENST00000557650 1227 ntBASIC14.41□□□□□ -0.1
SSR1P43307 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 RN7SL665P-201ENST00000578793 300 ntBASIC14.41□□□□□ -0.1
SSR1P43307 AC020922.3-201ENST00000595064 547 ntBASIC14.41□□□□□ -0.1
SSR1P43307 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 FAM90A2P-201ENST00000511144 1395 ntBASIC14.41□□□□□ -0.1
SSR1P43307 FAM90A25P-201ENST00000528404 1395 ntBASIC14.41□□□□□ -0.1
SSR1P43307 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.41□□□□□ -0.1
SSR1P43307 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SSR1P43307 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 CCT7P1-201ENST00000406551 1611 ntBASIC14.41□□□□□ -0.1
SSR1P43307 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 AC006372.4-201ENST00000624122 1543 ntBASIC14.41□□□□□ -0.1
SSR1P43307 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 AC007336.3-201ENST00000623886 2160 ntBASIC14.4□□□□□ -0.1
SSR1P43307 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 CAP2P1-201ENST00000557743 1390 ntBASIC14.4□□□□□ -0.1
SSR1P43307 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 RPL3P2-204ENST00000413027 1203 ntBASIC14.4□□□□□ -0.1
SSR1P43307 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 RN7SL258P-201ENST00000478664 300 ntBASIC14.4□□□□□ -0.1
SSR1P43307 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 AC024681.1-201ENST00000521917 487 ntBASIC14.4□□□□□ -0.1
SSR1P43307 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.4□□□□□ -0.1
SSR1P43307 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.4□□□□□ -0.1
SSR1P43307 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.4□□□□□ -0.1
SSR1P43307 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.4□□□□□ -0.1
SSR1P43307 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.4□□□□□ -0.1
SSR1P43307 AC015818.9-201ENST00000591705 4582 ntBASIC14.4□□□□□ -0.1
SSR1P43307 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SSR1P43307 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.4□□□□□ -0.1
SSR1P43307 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SSR1P43307 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSR1P43307 PDXDC2P-206ENST00000534700 1315 ntBASIC14.4□□□□□ -0.1
SSR1P43307 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SSR1P43307 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC14.39□□□□□ -0.11
SSR1P43307 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms