Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHAF3Q9NRP4 AC133637.1-201ENST00000624115 1537 ntBASIC20.27■□□□□ 0.83
SDHAF3Q9NRP4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SDHAF3Q9NRP4 AC135279.3-201ENST00000610945 1311 ntBASIC20.27■□□□□ 0.83
SDHAF3Q9NRP4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 PBX2P1-201ENST00000493219 1291 ntBASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 AL139246.5-201ENST00000606645 996 ntBASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHAF3Q9NRP4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDHAF3Q9NRP4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 AC106739.1-201ENST00000617035 715 ntBASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDHAF3Q9NRP4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 AC024257.2-201ENST00000549699 147 ntBASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDHAF3Q9NRP4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 AC110285.6-201ENST00000617652 491 ntBASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.22■□□□□ 0.83
SDHAF3Q9NRP4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SDHAF3Q9NRP4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms