Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)14.22□□□□□ -0.132e-6■■■■■ 31.8
XRN2Q9H0D6 DCAF5-204ENST00000553943 736 ntTSL 320.75■□□□□ 0.913e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-206ENST00000554681 759 ntTSL 215.39■□□□□ 0.053e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.053e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-207ENST00000556111 728 ntTSL 314.31□□□□□ -0.123e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC11.24□□□□□ -0.613e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.18□□□□□ -1.13e-6■■■■■ 31.7
XRN2Q9H0D6 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.71□□□□□ -1.173e-6■■■■■ 31.7
XRN2Q9H0D6 PPP4R1-228ENST00000584074 625 ntTSL 325.57■■□□□ 1.681e-10■■■■■ 31.6
XRN2Q9H0D6 PPP4R1-221ENST00000582240 578 ntTSL 424.09■■□□□ 1.451e-10■■■■■ 31.6
XRN2Q9H0D6 TSNARE1-202ENST00000518720 583 ntTSL 419.45■□□□□ 0.72e-6■■■■■ 31.6
XRN2Q9H0D6 SPPL2B-203ENST00000586332 496 ntTSL 319.19■□□□□ 0.663e-6■■■■■ 31.6
XRN2Q9H0D6 PPP4R1-218ENST00000580745 535 ntTSL 413.45□□□□□ -0.261e-10■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.65■■□□□ 1.382e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-205ENST00000589183 796 ntTSL 322.33■■□□□ 1.172e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.052e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.032e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-208ENST00000591770 864 ntTSL 219.76■□□□□ 0.752e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.09■□□□□ 0.652e-8■■■■■ 31.6
XRN2Q9H0D6 SYNGR2-204ENST00000589168 2125 ntTSL 218.98■□□□□ 0.632e-8■■■■■ 31.6
XRN2Q9H0D6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.55■■■□□ 2.962e-19■■■■■ 31.5
XRN2Q9H0D6 GRB10-221ENST00000483819 657 ntTSL 226.11■■□□□ 1.778e-8■■■■■ 31.5
XRN2Q9H0D6 ITSN1-220ENST00000451686 501 ntTSL 425.88■■□□□ 1.731e-6■■■■■ 31.5
XRN2Q9H0D6 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)24.07■■□□□ 1.442e-8■■■■■ 31.5
XRN2Q9H0D6 ITSN1-224ENST00000470742 474 ntTSL 423.86■■□□□ 1.411e-6■■■■■ 31.5
XRN2Q9H0D6 ITSN1-219ENST00000444491 827 ntTSL 421.98■■□□□ 1.111e-6■■■■■ 31.5
XRN2Q9H0D6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.538e-8■■■■■ 31.5
XRN2Q9H0D6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.441e-6■■■■■ 31.5
XRN2Q9H0D6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.192e-8■■■■■ 31.5
XRN2Q9H0D6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.79■□□□□ 0.121e-6■■■■■ 31.5
XRN2Q9H0D6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.112e-8■■■■■ 31.5
XRN2Q9H0D6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.66■□□□□ 0.11e-6■■■■■ 31.5
XRN2Q9H0D6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.44■□□□□ 0.061e-6■■■■■ 31.5
XRN2Q9H0D6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.011e-6■■■■■ 31.5
XRN2Q9H0D6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.89□□□□□ -0.032e-8■■■■■ 31.5
XRN2Q9H0D6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.072e-8■■■■■ 31.5
XRN2Q9H0D6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.131e-12■■■■■ 31.5
XRN2Q9H0D6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.87□□□□□ -0.191e-6■■■■■ 31.5
XRN2Q9H0D6 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.12□□□□□ -0.311e-6■■■■■ 31.5
XRN2Q9H0D6 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.1□□□□□ -0.311e-6■■■■■ 31.5
XRN2Q9H0D6 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC12.99□□□□□ -0.331e-12■■■■■ 31.5
XRN2Q9H0D6 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.553e-7■■■■■ 31.5
XRN2Q9H0D6 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC11.45□□□□□ -0.581e-6■■■■■ 31.5
XRN2Q9H0D6 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.983e-7■■■■■ 31.5
XRN2Q9H0D6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.191e-6■■■■■ 31.5
XRN2Q9H0D6 SASH1-202ENST00000367469 591 ntTSL 33.8□□□□□ -1.81e-6■■■■■ 31.5
XRN2Q9H0D6 CFLAR-222ENST00000474842 1091 ntTSL 1 (best)12.96□□□□□ -0.332e-8■■■■■ 31.5
XRN2Q9H0D6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.392e-6■■■■■ 31.5
XRN2Q9H0D6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.75■■□□□ 1.552e-6■■■■■ 31.5
XRN2Q9H0D6 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.751e-6■■■■■ 31.5
XRN2Q9H0D6 BCOR-206ENST00000406200 4216 ntTSL 29.67□□□□□ -0.861e-6■■■■■ 31.5
XRN2Q9H0D6 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.941e-6■■■■■ 31.5
XRN2Q9H0D6 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)12.06□□□□□ -0.484e-7■■■■■ 31.4
XRN2Q9H0D6 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.8□□□□□ -1.164e-7■■■■■ 31.4
XRN2Q9H0D6 DYRK1A-205ENST00000426672 519 ntTSL 54.05□□□□□ -1.764e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.37■□□□□ 0.051e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.161e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-206ENST00000431914 634 ntTSL 413.53□□□□□ -0.241e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.521e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.531e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.91e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-207ENST00000433400 596 ntTSL 45.91□□□□□ -1.461e-7■■■■■ 31.4
XRN2Q9H0D6 CTNNB1-205ENST00000426215 563 ntTSL 44.22□□□□□ -1.731e-7■■■■■ 31.4
XRN2Q9H0D6 KIAA0368-206ENST00000602978 539 ntAPPRIS ALT2 TSL 423.8■■□□□ 1.41e-6■■■■■ 31.4
XRN2Q9H0D6 KIAA0368-205ENST00000602447 2806 ntAPPRIS ALT2 TSL 517.47■□□□□ 0.391e-6■■■■■ 31.4
XRN2Q9H0D6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.041e-6■■■■■ 31.4
XRN2Q9H0D6 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.561e-6■■■■■ 31.4
XRN2Q9H0D6 ULK1-205ENST00000541761 1262 ntTSL 217.89■□□□□ 0.452e-8■■■■■ 31.4
XRN2Q9H0D6 RHBDL1-204ENST00000561556 796 ntTSL 327.86■■■□□ 2.059e-8■■■■■ 31.3
XRN2Q9H0D6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.759e-8■■■■■ 31.3
XRN2Q9H0D6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.459e-8■■■■■ 31.3
XRN2Q9H0D6 BRAF-202ENST00000469930 1058 ntTSL 223.33■■□□□ 1.339e-8■■■■■ 31.3
XRN2Q9H0D6 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)23.1■■□□□ 1.299e-8■■■■■ 31.3
XRN2Q9H0D6 ATL2-211ENST00000456736 578 ntTSL 320.63■□□□□ 0.899e-8■■■■■ 31.3
XRN2Q9H0D6 TRAM1-204ENST00000521049 872 ntTSL 520.31■□□□□ 0.843e-7■■■■■ 31.3
XRN2Q9H0D6 TRAM1-202ENST00000518678 535 ntTSL 420.12■□□□□ 0.813e-7■■■■■ 31.3
XRN2Q9H0D6 TRAM1-203ENST00000520700 542 ntTSL 519.81■□□□□ 0.763e-7■■■■■ 31.3
XRN2Q9H0D6 ARHGAP17-211ENST00000573449 574 ntTSL 319.71■□□□□ 0.755e-11■■■■■ 31.3
XRN2Q9H0D6 ATL2-212ENST00000472097 561 ntTSL 319.63■□□□□ 0.739e-8■■■■■ 31.3
XRN2Q9H0D6 ATL2-205ENST00000416222 593 ntTSL 419.63■□□□□ 0.739e-8■■■■■ 31.3
XRN2Q9H0D6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.739e-8■■■■■ 31.3
XRN2Q9H0D6 KIAA0355-204ENST00000588470 632 ntTSL 519.44■□□□□ 0.78e-12■■■■■ 31.3
XRN2Q9H0D6 ATL2-208ENST00000449130 526 ntTSL 319.43■□□□□ 0.79e-8■■■■■ 31.3
XRN2Q9H0D6 ARHGAP17-207ENST00000571480 645 ntTSL 419.27■□□□□ 0.685e-11■■■■■ 31.3
XRN2Q9H0D6 KIAA0355-206ENST00000589583 582 ntTSL 319.25■□□□□ 0.678e-12■■■■■ 31.3
XRN2Q9H0D6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.359e-8■■■■■ 31.3
XRN2Q9H0D6 POFUT2-211ENST00000493524 890 ntTSL 517.15■□□□□ 0.349e-8■■■■■ 31.3
XRN2Q9H0D6 FBXO34-203ENST00000554940 577 ntTSL 417■□□□□ 0.312e-10■■■■■ 31.3
XRN2Q9H0D6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.293e-7■■■■■ 31.3
XRN2Q9H0D6 ATL2-209ENST00000451483 576 ntTSL 416.48■□□□□ 0.239e-8■■■■■ 31.3
XRN2Q9H0D6 POFUT2-207ENST00000468360 757 ntTSL 515.91■□□□□ 0.149e-8■■■■■ 31.3
XRN2Q9H0D6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.059e-8■■■■■ 31.3
XRN2Q9H0D6 ATL2-203ENST00000405384 1905 ntTSL 1 (best)15.29■□□□□ 0.049e-8■■■■■ 31.3
XRN2Q9H0D6 ARHGAP17-217ENST00000575447 559 ntTSL 214.56□□□□□ -0.085e-11■■■■■ 31.3
XRN2Q9H0D6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.122e-10■■■■■ 31.3
XRN2Q9H0D6 ATL2-207ENST00000443098 775 ntTSL 514.24□□□□□ -0.139e-8■■■■■ 31.3
XRN2Q9H0D6 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC13.99□□□□□ -0.179e-8■■■■■ 31.3
XRN2Q9H0D6 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.29e-8■■■■■ 31.3
XRN2Q9H0D6 POFUT2-204ENST00000451615 795 ntTSL 513.7□□□□□ -0.229e-8■■■■■ 31.3
Retrieved 100 of 21,068 protein–RNA pairs in 352.4 ms