Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
USB1Q9BQ65 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.6■□□□□ 0.73
USB1Q9BQ65 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
USB1Q9BQ65 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USB1Q9BQ65 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USB1Q9BQ65 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 BX842568.3-201ENST00000418104 571 ntBASIC19.59■□□□□ 0.73
USB1Q9BQ65 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.59■□□□□ 0.73
USB1Q9BQ65 AP001330.3-201ENST00000520123 633 ntBASIC19.59■□□□□ 0.73
USB1Q9BQ65 DUX4L4-201ENST00000566884 1269 ntBASIC19.59■□□□□ 0.73
USB1Q9BQ65 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USB1Q9BQ65 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USB1Q9BQ65 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USB1Q9BQ65 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USB1Q9BQ65 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USB1Q9BQ65 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.58■□□□□ 0.72
USB1Q9BQ65 AF213884.3-201ENST00000563833 479 ntBASIC19.58■□□□□ 0.72
USB1Q9BQ65 pRNA.6-201ENST00000610482 90 ntBASIC19.58■□□□□ 0.72
USB1Q9BQ65 pRNA.5-201ENST00000612139 90 ntBASIC19.58■□□□□ 0.72
USB1Q9BQ65 pRNA.11-201ENST00000618423 90 ntBASIC19.58■□□□□ 0.72
USB1Q9BQ65 pRNA.13-201ENST00000619112 90 ntBASIC19.58■□□□□ 0.72
USB1Q9BQ65 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.58■□□□□ 0.72
USB1Q9BQ65 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USB1Q9BQ65 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USB1Q9BQ65 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USB1Q9BQ65 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USB1Q9BQ65 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 AL499627.2-201ENST00000606283 725 ntBASIC19.57■□□□□ 0.72
USB1Q9BQ65 AC233992.3-201ENST00000607491 485 ntBASIC19.57■□□□□ 0.72
USB1Q9BQ65 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.57■□□□□ 0.72
USB1Q9BQ65 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USB1Q9BQ65 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USB1Q9BQ65 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USB1Q9BQ65 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USB1Q9BQ65 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USB1Q9BQ65 AC144652.1-201ENST00000609974 1624 ntBASIC19.55■□□□□ 0.72
USB1Q9BQ65 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USB1Q9BQ65 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USB1Q9BQ65 AC006455.2-201ENST00000429931 906 ntBASIC19.55■□□□□ 0.72
USB1Q9BQ65 LINC01529-204ENST00000636474 1715 ntBASIC19.55■□□□□ 0.72
USB1Q9BQ65 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USB1Q9BQ65 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.55■□□□□ 0.72
USB1Q9BQ65 AC068473.5-201ENST00000616428 2072 ntBASIC19.55■□□□□ 0.72
USB1Q9BQ65 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USB1Q9BQ65 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USB1Q9BQ65 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USB1Q9BQ65 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USB1Q9BQ65 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.54■□□□□ 0.72
USB1Q9BQ65 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USB1Q9BQ65 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms