Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC010525.1-201ENST00000585559 441 ntBASIC23.87■■□□□ 1.41
BEST2Q8NFU1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BEST2Q8NFU1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BEST2Q8NFU1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
BEST2Q8NFU1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
BEST2Q8NFU1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BEST2Q8NFU1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BEST2Q8NFU1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.85■■□□□ 1.41
BEST2Q8NFU1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 AC026271.2-201ENST00000428091 497 ntBASIC23.84■■□□□ 1.41
BEST2Q8NFU1 RARRES2P6-201ENST00000567333 442 ntBASIC23.84■■□□□ 1.41
BEST2Q8NFU1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
BEST2Q8NFU1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
BEST2Q8NFU1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
BEST2Q8NFU1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.83■■□□□ 1.4
BEST2Q8NFU1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST2Q8NFU1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST2Q8NFU1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
BEST2Q8NFU1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 TSPY26P-201ENST00000476365 1326 ntBASIC23.79■■□□□ 1.4
BEST2Q8NFU1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST2Q8NFU1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
BEST2Q8NFU1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEST2Q8NFU1 IGHV3-19-201ENST00000521488 291 ntBASIC23.78■■□□□ 1.4
BEST2Q8NFU1 AP005435.1-201ENST00000529293 1178 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms