Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 AC034268.1-201ENST00000441047 882 ntBASIC25.04■■□□□ 1.6
RETREG2Q8NC44 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 AC126544.1-201ENST00000580842 1059 ntBASIC25.04■■□□□ 1.6
RETREG2Q8NC44 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETREG2Q8NC44 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RETREG2Q8NC44 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RETREG2Q8NC44 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RETREG2Q8NC44 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RETREG2Q8NC44 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.01■■□□□ 1.59
RETREG2Q8NC44 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RETREG2Q8NC44 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RETREG2Q8NC44 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25■■□□□ 1.59
RETREG2Q8NC44 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25■■□□□ 1.59
RETREG2Q8NC44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25■■□□□ 1.59
RETREG2Q8NC44 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RETREG2Q8NC44 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RETREG2Q8NC44 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25■■□□□ 1.59
RETREG2Q8NC44 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 pRNA.6-201ENST00000610482 90 ntBASIC24.99■■□□□ 1.59
RETREG2Q8NC44 pRNA.5-201ENST00000612139 90 ntBASIC24.99■■□□□ 1.59
RETREG2Q8NC44 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 pRNA.11-201ENST00000618423 90 ntBASIC24.99■■□□□ 1.59
RETREG2Q8NC44 pRNA.13-201ENST00000619112 90 ntBASIC24.99■■□□□ 1.59
RETREG2Q8NC44 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RETREG2Q8NC44 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RETREG2Q8NC44 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETREG2Q8NC44 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RETREG2Q8NC44 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
RETREG2Q8NC44 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms