Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 FP325331.1-202ENST00000623531 1380 ntBASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPRX1Q8N7U7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPRX1Q8N7U7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 DUX4L4-201ENST00000566884 1269 ntBASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPRX1Q8N7U7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TPRX1Q8N7U7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPRX1Q8N7U7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 AC006455.2-201ENST00000429931 906 ntBASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 AL512631.2-201ENST00000604634 923 ntBASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRX1Q8N7U7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 AC004687.1-201ENST00000579003 1625 ntBASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRX1Q8N7U7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms