Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.8■■□□□ 1.08
EFCAB3Q8N7B9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCAB3Q8N7B9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 AC131274.2-201ENST00000580697 1507 ntBASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 AC137767.1-201ENST00000602918 1920 ntBASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.78■■□□□ 1.08
EFCAB3Q8N7B9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.77■■□□□ 1.08
EFCAB3Q8N7B9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 AL161729.1-201ENST00000604104 1402 ntBASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 AC127496.7-201ENST00000625110 1798 ntBASIC21.76■■□□□ 1.07
EFCAB3Q8N7B9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 MTDHP2-201ENST00000601468 714 ntBASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 AL356740.2-201ENST00000601559 647 ntBASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 AC010997.5-201ENST00000609182 354 ntBASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 AC005837.3-201ENST00000612163 286 ntBASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EFCAB3Q8N7B9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 AC244517.3-201ENST00000616254 1235 ntBASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 AL117332.1-201ENST00000622628 974 ntBASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
EFCAB3Q8N7B9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 AC096631.2-201ENST00000436136 790 ntBASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 AC110285.6-201ENST00000617652 491 ntBASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCAB3Q8N7B9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
EFCAB3Q8N7B9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms