Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.95■■■■□ 3.19
VPS8Q8N3P4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
VPS8Q8N3P4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC34.94■■■■□ 3.18
VPS8Q8N3P4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.93■■■■□ 3.18
VPS8Q8N3P4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
VPS8Q8N3P4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
VPS8Q8N3P4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
VPS8Q8N3P4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
VPS8Q8N3P4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
VPS8Q8N3P4 AL031602.1-201ENST00000633169 911 ntBASIC34.91■■■■□ 3.18
VPS8Q8N3P4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC34.91■■■■□ 3.18
VPS8Q8N3P4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC34.9■■■■□ 3.18
VPS8Q8N3P4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.89■■■■□ 3.18
VPS8Q8N3P4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC34.89■■■■□ 3.18
VPS8Q8N3P4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
VPS8Q8N3P4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
VPS8Q8N3P4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
VPS8Q8N3P4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC34.88■■■■□ 3.17
VPS8Q8N3P4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC34.88■■■■□ 3.17
VPS8Q8N3P4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
VPS8Q8N3P4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
VPS8Q8N3P4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC34.87■■■■□ 3.17
VPS8Q8N3P4 AC126544.1-201ENST00000580842 1059 ntBASIC34.87■■■■□ 3.17
VPS8Q8N3P4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC34.87■■■■□ 3.17
VPS8Q8N3P4 TSPY26P-201ENST00000476365 1326 ntBASIC34.86■■■■□ 3.17
VPS8Q8N3P4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
VPS8Q8N3P4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC34.85■■■■□ 3.17
VPS8Q8N3P4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 AP005435.1-201ENST00000529293 1178 ntBASIC34.84■■■■□ 3.17
VPS8Q8N3P4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
VPS8Q8N3P4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
VPS8Q8N3P4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
VPS8Q8N3P4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
VPS8Q8N3P4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
VPS8Q8N3P4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
VPS8Q8N3P4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
VPS8Q8N3P4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
VPS8Q8N3P4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC34.82■■■■□ 3.16
VPS8Q8N3P4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC34.81■■■■□ 3.16
VPS8Q8N3P4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC34.81■■■■□ 3.16
VPS8Q8N3P4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC34.81■■■■□ 3.16
VPS8Q8N3P4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
VPS8Q8N3P4 NFE2L3P1-201ENST00000588207 1959 ntBASIC34.81■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms