Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.02■□□□□ 0.8
CROCCP3Q8IVE0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CROCCP3Q8IVE0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.79
CROCCP3Q8IVE0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.01■□□□□ 0.79
CROCCP3Q8IVE0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20■□□□□ 0.79
CROCCP3Q8IVE0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 AL157384.1-201ENST00000445995 2473 ntBASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.99■□□□□ 0.79
CROCCP3Q8IVE0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CROCCP3Q8IVE0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 AL161729.1-201ENST00000604104 1402 ntBASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 KRT18P10-201ENST00000388836 1287 ntBASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 DUX4L11-201ENST00000611504 1267 ntBASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 DUX4L12-201ENST00000614593 1267 ntBASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 DUX4L14-201ENST00000621227 1267 ntBASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CROCCP3Q8IVE0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 AC025884.2-201ENST00000553429 711 ntBASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.96■□□□□ 0.79
CROCCP3Q8IVE0 FAM99A-202ENST00000538190 1989 ntBASIC19.95■□□□□ 0.78
CROCCP3Q8IVE0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CROCCP3Q8IVE0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.95■□□□□ 0.78
CROCCP3Q8IVE0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms