Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2NP61088 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE2NP61088 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.43■□□□□ 0.7
UBE2NP61088 AC133561.4-201ENST00000566112 224 ntBASIC19.43■□□□□ 0.7
UBE2NP61088 MIR4767-201ENST00000582827 78 ntBASIC19.43■□□□□ 0.7
UBE2NP61088 AL499627.2-201ENST00000606283 725 ntBASIC19.43■□□□□ 0.7
UBE2NP61088 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBE2NP61088 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2NP61088 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2NP61088 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.42■□□□□ 0.7
UBE2NP61088 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2NP61088 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2NP61088 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2NP61088 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2NP61088 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 EDA-201ENST00000338901 1233 ntBASIC19.41■□□□□ 0.7
UBE2NP61088 MIR638-201ENST00000385237 100 ntBASIC19.41■□□□□ 0.7
UBE2NP61088 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.41■□□□□ 0.7
UBE2NP61088 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2NP61088 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE2NP61088 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
UBE2NP61088 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2NP61088 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.4■□□□□ 0.7
UBE2NP61088 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
UBE2NP61088 AL355001.2-201ENST00000620617 1191 ntBASIC19.4■□□□□ 0.7
UBE2NP61088 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2NP61088 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2NP61088 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2NP61088 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.39■□□□□ 0.7
UBE2NP61088 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2NP61088 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2NP61088 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2NP61088 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2NP61088 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.39■□□□□ 0.69
UBE2NP61088 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2NP61088 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2NP61088 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2NP61088 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2NP61088 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE2NP61088 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2NP61088 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2NP61088 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBE2NP61088 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.38■□□□□ 0.69
UBE2NP61088 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE2NP61088 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE2NP61088 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
UBE2NP61088 AC142381.2-201ENST00000566120 298 ntBASIC19.38■□□□□ 0.69
UBE2NP61088 AC005837.3-201ENST00000612163 286 ntBASIC19.38■□□□□ 0.69
UBE2NP61088 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE2NP61088 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2NP61088 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBE2NP61088 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBE2NP61088 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE2NP61088 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE2NP61088 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE2NP61088 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms