Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SAA4P35542 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.93■□□□□ 0.46
SAA4P35542 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SAA4P35542 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.93■□□□□ 0.46
SAA4P35542 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA4P35542 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.93■□□□□ 0.46
SAA4P35542 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SAA4P35542 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SAA4P35542 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.93■□□□□ 0.46
SAA4P35542 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA4P35542 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.92■□□□□ 0.46
SAA4P35542 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.92■□□□□ 0.46
SAA4P35542 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SAA4P35542 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA4P35542 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.92■□□□□ 0.46
SAA4P35542 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SAA4P35542 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA4P35542 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.91■□□□□ 0.46
SAA4P35542 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA4P35542 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SAA4P35542 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SAA4P35542 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA4P35542 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SAA4P35542 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SAA4P35542 TSPY26P-201ENST00000476365 1326 ntBASIC17.91■□□□□ 0.46
SAA4P35542 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SAA4P35542 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SAA4P35542 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA4P35542 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.9■□□□□ 0.46
SAA4P35542 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.9■□□□□ 0.46
SAA4P35542 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA4P35542 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA4P35542 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA4P35542 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SAA4P35542 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA4P35542 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.9■□□□□ 0.46
SAA4P35542 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SAA4P35542 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SAA4P35542 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.89■□□□□ 0.45
SAA4P35542 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SAA4P35542 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SAA4P35542 IRS3P-201ENST00000223076 1006 ntBASIC17.89■□□□□ 0.45
SAA4P35542 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SAA4P35542 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.89■□□□□ 0.45
SAA4P35542 IGHV3-19-201ENST00000521488 291 ntBASIC17.89■□□□□ 0.45
SAA4P35542 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.89■□□□□ 0.45
SAA4P35542 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.89■□□□□ 0.45
SAA4P35542 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SAA4P35542 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SAA4P35542 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SAA4P35542 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.89■□□□□ 0.45
SAA4P35542 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.89■□□□□ 0.45
SAA4P35542 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
SAA4P35542 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.88■□□□□ 0.45
SAA4P35542 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SAA4P35542 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SAA4P35542 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SAA4P35542 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.88■□□□□ 0.45
SAA4P35542 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA4P35542 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SAA4P35542 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.88■□□□□ 0.45
SAA4P35542 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.87■□□□□ 0.45
SAA4P35542 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SAA4P35542 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.87■□□□□ 0.45
SAA4P35542 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SAA4P35542 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.87■□□□□ 0.45
SAA4P35542 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.87■□□□□ 0.45
SAA4P35542 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA4P35542 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.87■□□□□ 0.45
SAA4P35542 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SAA4P35542 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms