Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 IFT122-203ENST00000348417 3877 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.288e-8■■■□□ 14.6
XRCC6P12956 IFT122-220ENST00000509815 422 ntTSL 512.93□□□□□ -0.348e-8■■■□□ 14.6
XRCC6P12956 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC12.62□□□□□ -0.398e-8■■■□□ 14.6
XRCC6P12956 IFT122-225ENST00000512220 4057 ntTSL 212.49□□□□□ -0.418e-8■■■□□ 14.6
XRCC6P12956 OGT-203ENST00000444774 556 ntTSL 412.45□□□□□ -0.428e-8■■■□□ 14.6
XRCC6P12956 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC12.02□□□□□ -0.498e-8■■■□□ 14.6
XRCC6P12956 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.58e-8■■■□□ 14.6
XRCC6P12956 USP36-219ENST00000591052 427 ntTSL 311.1□□□□□ -0.638e-8■■■□□ 14.6
XRCC6P12956 USP36-208ENST00000587379 606 ntTSL 311.07□□□□□ -0.648e-8■■■□□ 14.6
XRCC6P12956 SNX14-219ENST00000515216 3288 ntTSL 510.94□□□□□ -0.668e-8■■■□□ 14.6
XRCC6P12956 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC10.74□□□□□ -0.698e-8■■■□□ 14.6
XRCC6P12956 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC10.62□□□□□ -0.718e-8■■■□□ 14.6
XRCC6P12956 USP36-211ENST00000588130 602 ntTSL 29.58□□□□□ -0.888e-8■■■□□ 14.6
XRCC6P12956 OGT-204ENST00000455587 632 ntTSL 39.31□□□□□ -0.928e-8■■■□□ 14.6
XRCC6P12956 IFT122-217ENST00000508826 329 ntTSL 58.95□□□□□ -0.988e-8■■■□□ 14.6
XRCC6P12956 IFT122-208ENST00000502304 469 ntTSL 58.93□□□□□ -0.988e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-208ENST00000559367 539 ntTSL 58.07□□□□□ -1.128e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.28e-8■■■□□ 14.6
XRCC6P12956 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)7.29□□□□□ -1.248e-8■■■□□ 14.6
XRCC6P12956 IFT122-221ENST00000510524 418 ntTSL 56.48□□□□□ -1.378e-8■■■□□ 14.6
XRCC6P12956 IFT122-231ENST00000514275 296 ntTSL 56.14□□□□□ -1.438e-8■■■□□ 14.6
XRCC6P12956 IFT122-209ENST00000502456 445 ntTSL 56.14□□□□□ -1.438e-8■■■□□ 14.6
XRCC6P12956 IFT122-218ENST00000509195 350 ntTSL 55.19□□□□□ -1.588e-8■■■□□ 14.6
XRCC6P12956 OGT-211ENST00000498566 601 ntTSL 34.61□□□□□ -1.678e-8■■■□□ 14.6
XRCC6P12956 SNX14-216ENST00000513869 530 ntTSL 43.81□□□□□ -1.88e-8■■■□□ 14.6
XRCC6P12956 EML4-208ENST00000482660 584 ntTSL 419.69■□□□□ 0.742e-18■■□□□ 14.5
XRCC6P12956 EML4-205ENST00000409040 962 ntTSL 1 (best)18.71■□□□□ 0.592e-18■■□□□ 14.5
XRCC6P12956 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.372e-18■■□□□ 14.5
XRCC6P12956 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.372e-18■■□□□ 14.5
XRCC6P12956 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.482e-18■■□□□ 14.5
XRCC6P12956 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.549e-10■■□□□ 14.5
XRCC6P12956 SNRPF-203ENST00000551316 787 ntTSL 214.45□□□□□ -0.19e-10■■□□□ 14.5
XRCC6P12956 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.48□□□□□ -0.259e-10■■□□□ 14.5
XRCC6P12956 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.78□□□□□ -0.369e-10■■□□□ 14.5
XRCC6P12956 TTC3-223ENST00000492275 769 ntTSL 328.83■■■□□ 2.213e-6■■□□□ 14.4
XRCC6P12956 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.06■■■□□ 2.083e-6■■□□□ 14.4
XRCC6P12956 TTC3-210ENST00000450533 2451 ntTSL 1 (best)27.41■■□□□ 1.983e-6■■□□□ 14.4
XRCC6P12956 TTC3-212ENST00000463216 842 ntTSL 526.67■■□□□ 1.863e-6■■□□□ 14.4
XRCC6P12956 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.853e-6■■□□□ 14.4
XRCC6P12956 TTC3-224ENST00000494243 861 ntTSL 526.55■■□□□ 1.843e-6■■□□□ 14.4
XRCC6P12956 TTC3-217ENST00000481605 1540 ntTSL 526.1■■□□□ 1.773e-6■■□□□ 14.4
XRCC6P12956 ROCK2-201ENST00000261535 1795 ntTSL 525.81■■□□□ 1.723e-6■■□□□ 14.4
XRCC6P12956 FBXO31-204ENST00000565593 2717 ntTSL 525.23■■□□□ 1.633e-6■■□□□ 14.4
XRCC6P12956 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.6■■□□□ 1.533e-6■■□□□ 14.4
XRCC6P12956 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.143e-6■■□□□ 14.4
XRCC6P12956 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.053e-6■■□□□ 14.4
XRCC6P12956 TTC3-209ENST00000438055 3606 ntTSL 520.68■□□□□ 0.93e-6■■□□□ 14.4
XRCC6P12956 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.56■□□□□ 0.883e-6■■□□□ 14.4
XRCC6P12956 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.873e-6■■□□□ 14.4
XRCC6P12956 TTC3-207ENST00000418766 3771 ntTSL 520.4■□□□□ 0.863e-6■■□□□ 14.4
XRCC6P12956 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.773e-6■■□□□ 14.4
XRCC6P12956 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.79■□□□□ 0.63e-6■■□□□ 14.4
XRCC6P12956 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.63e-6■■□□□ 14.4
XRCC6P12956 TTC3-219ENST00000485402 3626 ntTSL 518.73■□□□□ 0.593e-6■■□□□ 14.4
XRCC6P12956 SIK3-211ENST00000485363 764 ntTSL 1 (best)17.68■□□□□ 0.423e-6■■□□□ 14.4
XRCC6P12956 CDK12-209ENST00000584632 4165 ntTSL 516.8■□□□□ 0.283e-6■■□□□ 14.4
XRCC6P12956 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.273e-6■■□□□ 14.4
XRCC6P12956 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC16.11■□□□□ 0.175e-6■■□□□ 14.4
XRCC6P12956 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-6■■□□□ 14.4
XRCC6P12956 AAGAB-206ENST00000561229 529 ntTSL 415.79■□□□□ 0.125e-6■■□□□ 14.4
XRCC6P12956 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 515.35■□□□□ 0.053e-6■■□□□ 14.4
XRCC6P12956 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■□□□ 14.4
XRCC6P12956 AAGAB-204ENST00000558725 810 ntTSL 315.27■□□□□ 0.045e-6■■□□□ 14.4
XRCC6P12956 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.265e-6■■□□□ 14.4
XRCC6P12956 OSBPL10-212ENST00000469557 584 ntTSL 212.24□□□□□ -0.453e-6■■□□□ 14.4
XRCC6P12956 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.563e-6■■□□□ 14.4
XRCC6P12956 IQGAP2-217ENST00000514350 2617 ntTSL 1 (best)10.83□□□□□ -0.683e-6■■□□□ 14.4
XRCC6P12956 SIK3-203ENST00000415541 3816 ntTSL 1 (best)9.95□□□□□ -0.823e-6■■□□□ 14.4
XRCC6P12956 OSBPL10-203ENST00000429492 7723 ntTSL 29.36□□□□□ -0.913e-6■■□□□ 14.4
XRCC6P12956 LINC01146-201ENST00000553496 425 ntTSL 38.93□□□□□ -0.983e-6■■□□□ 14.4
XRCC6P12956 LINC01146-205ENST00000556673 1182 ntTSL 38.8□□□□□ -13e-6■■□□□ 14.4
XRCC6P12956 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.133e-6■■□□□ 14.4
XRCC6P12956 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.91□□□□□ -1.35e-6■■□□□ 14.4
XRCC6P12956 ROCK2-206ENST00000462366 563 ntTSL 36.43□□□□□ -1.383e-6■■□□□ 14.4
XRCC6P12956 LAMTOR5-AS1-238ENST00000626572 1044 ntTSL 55.91□□□□□ -1.463e-6■■□□□ 14.4
XRCC6P12956 RARS2-202ENST00000451155 618 ntTSL 35.04□□□□□ -1.63e-6■■□□□ 14.4
XRCC6P12956 CDK12-206ENST00000581593 559 ntTSL 34.66□□□□□ -1.663e-6■■□□□ 14.4
XRCC6P12956 LINC01146-202ENST00000553929 413 ntTSL 34.44□□□□□ -1.73e-6■■□□□ 14.4
XRCC6P12956 MED24-225ENST00000580885 1963 ntTSL 521.39■■□□□ 1.024e-6■■□□□ 14.4
XRCC6P12956 MED24-213ENST00000535071 2441 ntTSL 520.15■□□□□ 0.824e-6■■□□□ 14.4
XRCC6P12956 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.224e-6■■□□□ 14.4
XRCC6P12956 MED24-214ENST00000535508 3334 ntTSL 216.34■□□□□ 0.214e-6■■□□□ 14.4
XRCC6P12956 MED24-201ENST00000356271 3446 ntTSL 2 BASIC15.57■□□□□ 0.084e-6■■□□□ 14.4
XRCC6P12956 MED24-203ENST00000394127 3456 ntTSL 2 BASIC15.22■□□□□ 0.034e-6■■□□□ 14.4
XRCC6P12956 MED24-212ENST00000501516 3037 ntTSL 5 BASIC14.94□□□□□ -0.024e-6■■□□□ 14.4
XRCC6P12956 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC13.8□□□□□ -0.24e-6■■□□□ 14.4
XRCC6P12956 MED24-219ENST00000578901 728 ntTSL 1 (best)9□□□□□ -0.974e-6■■□□□ 14.4
XRCC6P12956 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.86□□□□□ -0.994e-6■■□□□ 14.4
XRCC6P12956 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.88□□□□□ -1.635e-7■■□□□ 14.4
XRCC6P12956 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.745e-7■■□□□ 14.4
XRCC6P12956 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)24.15■■□□□ 1.466e-6■■□□□ 14.4
XRCC6P12956 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.436e-6■■□□□ 14.4
XRCC6P12956 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.93□□□□□ -1.787e-10■■□□□ 14.4
XRCC6P12956 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■□□□ 14.3
XRCC6P12956 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.91□□□□□ -0.182e-6■■□□□ 14.3
XRCC6P12956 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC13.69□□□□□ -0.222e-6■■□□□ 14.3
XRCC6P12956 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC12.43□□□□□ -0.422e-6■■□□□ 14.3
XRCC6P12956 UBAP2-212ENST00000629575 3460 ntTSL 29.53□□□□□ -0.884e-11■■□□□ 14.3
XRCC6P12956 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.014e-11■■□□□ 14.3
XRCC6P12956 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.014e-11■■□□□ 14.3
Retrieved 100 of 6,788 protein–RNA pairs in 46.8 ms