RNA–Protein interactions for RNA: ENST00000556673.2

LINC01146-205, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 1,182 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-205ENST00000556673 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
LINC01146-205ENST00000556673 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
LINC01146-205ENST00000556673 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
LINC01146-205ENST00000556673 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
LINC01146-205ENST00000556673 FOXD1Q16676 465 aa19.47■□□□□ 0.71
LINC01146-205ENST00000556673 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
LINC01146-205ENST00000556673 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
LINC01146-205ENST00000556673 ADRA2BP18089 450 aa18.32■□□□□ 0.52
LINC01146-205ENST00000556673 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
LINC01146-205ENST00000556673 MSH5O43196 834 aa18.19■□□□□ 0.5
LINC01146-205ENST00000556673 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
LINC01146-205ENST00000556673 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
LINC01146-205ENST00000556673 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
LINC01146-205ENST00000556673 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
LINC01146-205ENST00000556673 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
LINC01146-205ENST00000556673 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
LINC01146-205ENST00000556673 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
LINC01146-205ENST00000556673 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
LINC01146-205ENST00000556673 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
LINC01146-205ENST00000556673 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
LINC01146-205ENST00000556673 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
LINC01146-205ENST00000556673 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
LINC01146-205ENST00000556673 KCNA4P22459 653 aa15.65■□□□□ 0.1
LINC01146-205ENST00000556673 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
LINC01146-205ENST00000556673 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
LINC01146-205ENST00000556673 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
LINC01146-205ENST00000556673 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
LINC01146-205ENST00000556673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.057e-8■■■■□ 19.4
LINC01146-205ENST00000556673 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
LINC01146-205ENST00000556673 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
LINC01146-205ENST00000556673 SLC4A2P04920 1241 aa15.02■□□□□ -0
LINC01146-205ENST00000556673 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
LINC01146-205ENST00000556673 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
LINC01146-205ENST00000556673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
LINC01146-205ENST00000556673 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
LINC01146-205ENST00000556673 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
LINC01146-205ENST00000556673 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
LINC01146-205ENST00000556673 CAPN15O75808 1086 aa14.73□□□□□ -0.05
LINC01146-205ENST00000556673 APLP2Q06481 763 aa14.72□□□□□ -0.05
LINC01146-205ENST00000556673 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
LINC01146-205ENST00000556673 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
LINC01146-205ENST00000556673 DSG3P32926 999 aa14.6□□□□□ -0.07
LINC01146-205ENST00000556673 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
LINC01146-205ENST00000556673 FOXD4L1Q9NU39 408 aa14.57□□□□□ -0.08
LINC01146-205ENST00000556673 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
LINC01146-205ENST00000556673 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
LINC01146-205ENST00000556673 ABCC9O60706 1549 aa14.41□□□□□ -0.1
LINC01146-205ENST00000556673 NACADO15069 1562 aa14.39□□□□□ -0.11
LINC01146-205ENST00000556673 ABCB7O75027 752 aa14.37□□□□□ -0.11
LINC01146-205ENST00000556673 ZBTB22O15209 634 aa14.36□□□□□ -0.11
LINC01146-205ENST00000556673 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
LINC01146-205ENST00000556673 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
LINC01146-205ENST00000556673 POLA2Q14181 598 aa14.21□□□□□ -0.13
LINC01146-205ENST00000556673 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
LINC01146-205ENST00000556673 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
LINC01146-205ENST00000556673 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
LINC01146-205ENST00000556673 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
LINC01146-205ENST00000556673 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
LINC01146-205ENST00000556673 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
LINC01146-205ENST00000556673 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
LINC01146-205ENST00000556673 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
LINC01146-205ENST00000556673 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
LINC01146-205ENST00000556673 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
LINC01146-205ENST00000556673 FBLN2P98095 1184 aa13.71□□□□□ -0.21
LINC01146-205ENST00000556673 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
LINC01146-205ENST00000556673 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
LINC01146-205ENST00000556673 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
LINC01146-205ENST00000556673 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
LINC01146-205ENST00000556673 POTEHQ6S545 545 aa13.65□□□□□ -0.22
LINC01146-205ENST00000556673 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
LINC01146-205ENST00000556673 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
LINC01146-205ENST00000556673 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
LINC01146-205ENST00000556673 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
LINC01146-205ENST00000556673 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
LINC01146-205ENST00000556673 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
LINC01146-205ENST00000556673 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
LINC01146-205ENST00000556673 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
LINC01146-205ENST00000556673 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
LINC01146-205ENST00000556673 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
LINC01146-205ENST00000556673 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
LINC01146-205ENST00000556673 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC01146-205ENST00000556673 WIZO95785 1651 aa13.48□□□□□ -0.25
LINC01146-205ENST00000556673 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
LINC01146-205ENST00000556673 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
LINC01146-205ENST00000556673 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
LINC01146-205ENST00000556673 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
LINC01146-205ENST00000556673 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
LINC01146-205ENST00000556673 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
LINC01146-205ENST00000556673 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
LINC01146-205ENST00000556673 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
LINC01146-205ENST00000556673 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
LINC01146-205ENST00000556673 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
LINC01146-205ENST00000556673 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
LINC01146-205ENST00000556673 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
LINC01146-205ENST00000556673 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01146-205ENST00000556673 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
LINC01146-205ENST00000556673 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
LINC01146-205ENST00000556673 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
LINC01146-205ENST00000556673 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
LINC01146-205ENST00000556673 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms