Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBL4AP11441 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBL4AP11441 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.39■□□□□ 0.86
UBL4AP11441 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.39■□□□□ 0.86
UBL4AP11441 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBL4AP11441 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
UBL4AP11441 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.39■□□□□ 0.85
UBL4AP11441 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.39■□□□□ 0.85
UBL4AP11441 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBL4AP11441 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UBL4AP11441 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBL4AP11441 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBL4AP11441 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.38■□□□□ 0.85
UBL4AP11441 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBL4AP11441 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
UBL4AP11441 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBL4AP11441 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.38■□□□□ 0.85
UBL4AP11441 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBL4AP11441 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.38■□□□□ 0.85
UBL4AP11441 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.38■□□□□ 0.85
UBL4AP11441 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
UBL4AP11441 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBL4AP11441 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBL4AP11441 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
UBL4AP11441 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBL4AP11441 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBL4AP11441 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBL4AP11441 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
UBL4AP11441 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.36■□□□□ 0.85
UBL4AP11441 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
UBL4AP11441 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBL4AP11441 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UBL4AP11441 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBL4AP11441 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBL4AP11441 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.36■□□□□ 0.85
UBL4AP11441 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.36■□□□□ 0.85
UBL4AP11441 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.36■□□□□ 0.85
UBL4AP11441 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.36■□□□□ 0.85
UBL4AP11441 AC009086.3-201ENST00000623486 1008 ntBASIC20.36■□□□□ 0.85
UBL4AP11441 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.36■□□□□ 0.85
UBL4AP11441 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBL4AP11441 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBL4AP11441 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
UBL4AP11441 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBL4AP11441 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
UBL4AP11441 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
UBL4AP11441 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
UBL4AP11441 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
UBL4AP11441 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.35■□□□□ 0.85
UBL4AP11441 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 AC241377.3-202ENST00000626088 1088 ntBASIC20.35■□□□□ 0.85
UBL4AP11441 AC241585.3-202ENST00000628937 1088 ntBASIC20.35■□□□□ 0.85
UBL4AP11441 AC245100.8-202ENST00000629247 1058 ntBASIC20.35■□□□□ 0.85
UBL4AP11441 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.35■□□□□ 0.85
UBL4AP11441 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.35■□□□□ 0.85
UBL4AP11441 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL4AP11441 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL4AP11441 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBL4AP11441 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL4AP11441 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.34■□□□□ 0.85
UBL4AP11441 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL4AP11441 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.34■□□□□ 0.85
UBL4AP11441 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
UBL4AP11441 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBL4AP11441 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.34■□□□□ 0.85
UBL4AP11441 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
UBL4AP11441 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.34■□□□□ 0.85
UBL4AP11441 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.34■□□□□ 0.85
UBL4AP11441 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBL4AP11441 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBL4AP11441 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
UBL4AP11441 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UBL4AP11441 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.33■□□□□ 0.85
UBL4AP11441 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBL4AP11441 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBL4AP11441 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.33■□□□□ 0.85
UBL4AP11441 SRD5A1P1-201ENST00000442297 786 ntBASIC20.33■□□□□ 0.85
UBL4AP11441 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.33■□□□□ 0.85
UBL4AP11441 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
UBL4AP11441 AL512631.2-201ENST00000604634 923 ntBASIC20.33■□□□□ 0.85
UBL4AP11441 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.33■□□□□ 0.84
UBL4AP11441 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.33■□□□□ 0.84
UBL4AP11441 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBL4AP11441 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms