Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
FREM3P0C091 AC068473.5-201ENST00000616428 2072 ntBASIC20.16■□□□□ 0.82
FREM3P0C091 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FREM3P0C091 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.16■□□□□ 0.82
FREM3P0C091 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 BX842568.3-201ENST00000418104 571 ntBASIC20.15■□□□□ 0.82
FREM3P0C091 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.15■□□□□ 0.82
FREM3P0C091 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
FREM3P0C091 AC136469.2-201ENST00000623944 1028 ntBASIC20.15■□□□□ 0.82
FREM3P0C091 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FREM3P0C091 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.15■□□□□ 0.82
FREM3P0C091 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.15■□□□□ 0.82
FREM3P0C091 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FREM3P0C091 AC133637.1-201ENST00000624115 1537 ntBASIC20.15■□□□□ 0.82
FREM3P0C091 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.15■□□□□ 0.82
FREM3P0C091 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FREM3P0C091 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
FREM3P0C091 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
FREM3P0C091 AC092171.4-201ENST00000609130 632 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 pRNA.6-201ENST00000610482 90 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 pRNA.5-201ENST00000612139 90 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 pRNA.11-201ENST00000618423 90 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 pRNA.13-201ENST00000619112 90 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.14■□□□□ 0.81
FREM3P0C091 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FREM3P0C091 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FREM3P0C091 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FREM3P0C091 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
FREM3P0C091 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FREM3P0C091 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
FREM3P0C091 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.14■□□□□ 0.81
FREM3P0C091 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.14■□□□□ 0.81
FREM3P0C091 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FREM3P0C091 CA15P2-201ENST00000611168 834 ntBASIC20.14■□□□□ 0.81
FREM3P0C091 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.14■□□□□ 0.81
FREM3P0C091 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FREM3P0C091 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.13■□□□□ 0.81
FREM3P0C091 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.13■□□□□ 0.81
FREM3P0C091 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
FREM3P0C091 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.13■□□□□ 0.81
FREM3P0C091 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.13■□□□□ 0.81
FREM3P0C091 AC233992.3-201ENST00000607491 485 ntBASIC20.13■□□□□ 0.81
FREM3P0C091 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.13■□□□□ 0.81
FREM3P0C091 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
FREM3P0C091 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.13■□□□□ 0.81
FREM3P0C091 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.13■□□□□ 0.81
FREM3P0C091 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FREM3P0C091 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FREM3P0C091 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.12■□□□□ 0.81
FREM3P0C091 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.12■□□□□ 0.81
FREM3P0C091 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
FREM3P0C091 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FREM3P0C091 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.12■□□□□ 0.81
FREM3P0C091 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.12■□□□□ 0.81
FREM3P0C091 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.12■□□□□ 0.81
FREM3P0C091 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
FREM3P0C091 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.12■□□□□ 0.81
FREM3P0C091 AC092068.2-201ENST00000590491 1708 ntBASIC20.12■□□□□ 0.81
FREM3P0C091 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FREM3P0C091 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
FREM3P0C091 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.11■□□□□ 0.81
FREM3P0C091 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.11■□□□□ 0.81
FREM3P0C091 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
FREM3P0C091 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
FREM3P0C091 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.11■□□□□ 0.81
FREM3P0C091 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 AC126544.1-201ENST00000580842 1059 ntBASIC20.11■□□□□ 0.81
FREM3P0C091 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.11■□□□□ 0.81
FREM3P0C091 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.11■□□□□ 0.81
FREM3P0C091 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms