Protein–RNA interactions for Protein: P09234

SNRPC, U1 small nuclear ribonucleoprotein C, humanhuman

Known RBP Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP09234 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPCP09234 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPCP09234 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPCP09234 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SNRPCP09234 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNRPCP09234 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRPCP09234 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRPCP09234 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SNRPCP09234 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNRPCP09234 LONRF2P2-201ENST00000439212 571 ntBASIC17.36■□□□□ 0.37
SNRPCP09234 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 AC129492.7-201ENST00000622992 756 ntBASIC17.36■□□□□ 0.37
SNRPCP09234 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNRPCP09234 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPCP09234 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPCP09234 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPCP09234 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPCP09234 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRPCP09234 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRPCP09234 DUX4L18-201ENST00000553347 1267 ntBASIC17.35■□□□□ 0.37
SNRPCP09234 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 AC131274.2-201ENST00000580697 1507 ntBASIC17.35■□□□□ 0.37
SNRPCP09234 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPCP09234 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPCP09234 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNRPCP09234 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNRPCP09234 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPCP09234 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.34■□□□□ 0.37
SNRPCP09234 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.34■□□□□ 0.37
SNRPCP09234 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPCP09234 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPCP09234 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPCP09234 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPCP09234 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SNRPCP09234 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPCP09234 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNRPCP09234 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNRPCP09234 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPCP09234 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPCP09234 ALDH1A3-203ENST00000557963 1670 ntBASIC17.33■□□□□ 0.37
SNRPCP09234 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPCP09234 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNRPCP09234 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
SNRPCP09234 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPCP09234 RARRES2P2-201ENST00000394842 485 ntBASIC17.33■□□□□ 0.36
SNRPCP09234 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.33■□□□□ 0.36
SNRPCP09234 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPCP09234 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SNRPCP09234 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPCP09234 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNRPCP09234 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.33■□□□□ 0.36
SNRPCP09234 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPCP09234 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.33■□□□□ 0.36
SNRPCP09234 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.32■□□□□ 0.36
SNRPCP09234 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNRPCP09234 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.32■□□□□ 0.36
SNRPCP09234 LINC00526-201ENST00000581067 1875 ntBASIC17.32■□□□□ 0.36
SNRPCP09234 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SNRPCP09234 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.32■□□□□ 0.36
SNRPCP09234 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNRPCP09234 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNRPCP09234 AL161729.1-201ENST00000604104 1402 ntBASIC17.31■□□□□ 0.36
SNRPCP09234 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SNRPCP09234 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.31■□□□□ 0.36
SNRPCP09234 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNRPCP09234 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SNRPCP09234 KRT18P60-201ENST00000312876 1297 ntBASIC17.31■□□□□ 0.36
SNRPCP09234 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNRPCP09234 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.31■□□□□ 0.36
SNRPCP09234 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNRPCP09234 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms