Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.57■■□□□ 1.2
PRAMEF11O60813 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRAMEF11O60813 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRAMEF11O60813 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 MIR4767-201ENST00000582827 78 ntBASIC22.56■■□□□ 1.2
PRAMEF11O60813 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRAMEF11O60813 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRAMEF11O60813 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.56■■□□□ 1.2
PRAMEF11O60813 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.55■■□□□ 1.2
PRAMEF11O60813 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
PRAMEF11O60813 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF11O60813 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.54■■□□□ 1.2
PRAMEF11O60813 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PRAMEF11O60813 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF11O60813 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF11O60813 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF11O60813 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF11O60813 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF11O60813 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PRAMEF11O60813 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.52■■□□□ 1.2
PRAMEF11O60813 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF11O60813 OR2I1P-207ENST00000453522 948 ntBASIC22.52■■□□□ 1.2
PRAMEF11O60813 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.52■■□□□ 1.2
PRAMEF11O60813 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.52■■□□□ 1.2
PRAMEF11O60813 AC133561.4-201ENST00000566112 224 ntBASIC22.52■■□□□ 1.2
PRAMEF11O60813 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.52■■□□□ 1.2
PRAMEF11O60813 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
PRAMEF11O60813 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
PRAMEF11O60813 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRAMEF11O60813 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.51■■□□□ 1.19
PRAMEF11O60813 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF11O60813 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.5■■□□□ 1.19
PRAMEF11O60813 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF11O60813 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF11O60813 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF11O60813 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 EDA-201ENST00000338901 1233 ntBASIC22.49■■□□□ 1.19
PRAMEF11O60813 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 C9orf163-202ENST00000624034 2573 ntBASIC22.49■■□□□ 1.19
PRAMEF11O60813 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF11O60813 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF11O60813 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF11O60813 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF11O60813 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PRAMEF11O60813 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PRAMEF11O60813 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.48■■□□□ 1.19
PRAMEF11O60813 AL031432.3-201ENST00000607698 485 ntBASIC22.48■■□□□ 1.19
PRAMEF11O60813 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.48■■□□□ 1.19
PRAMEF11O60813 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.48■■□□□ 1.19
PRAMEF11O60813 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF11O60813 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms