Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN4O14493 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN4O14493 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN4O14493 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN4O14493 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN4O14493 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN4O14493 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN4O14493 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN4O14493 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN4O14493 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN4O14493 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN4O14493 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN4O14493 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN4O14493 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
CLDN4O14493 AC133561.4-201ENST00000566112 224 ntBASIC20.84■□□□□ 0.93
CLDN4O14493 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.84■□□□□ 0.93
CLDN4O14493 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLDN4O14493 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN4O14493 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN4O14493 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CLDN4O14493 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN4O14493 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CLDN4O14493 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLDN4O14493 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLDN4O14493 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN4O14493 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN4O14493 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN4O14493 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN4O14493 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN4O14493 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN4O14493 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CLDN4O14493 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN4O14493 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN4O14493 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN4O14493 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN4O14493 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN4O14493 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CLDN4O14493 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN4O14493 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN4O14493 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN4O14493 EDA-201ENST00000338901 1233 ntBASIC20.81■□□□□ 0.92
CLDN4O14493 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN4O14493 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN4O14493 MIR4767-201ENST00000582827 78 ntBASIC20.81■□□□□ 0.92
CLDN4O14493 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
CLDN4O14493 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN4O14493 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN4O14493 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN4O14493 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLDN4O14493 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN4O14493 AC004687.1-201ENST00000579003 1625 ntBASIC20.8■□□□□ 0.92
CLDN4O14493 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN4O14493 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.8■□□□□ 0.92
CLDN4O14493 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN4O14493 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN4O14493 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLDN4O14493 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN4O14493 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN4O14493 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN4O14493 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN4O14493 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN4O14493 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN4O14493 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN4O14493 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN4O14493 AL355001.2-201ENST00000620617 1191 ntBASIC20.78■□□□□ 0.92
CLDN4O14493 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN4O14493 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms