Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 BX679664.3-201ENST00000414070 555 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AL354877.1-201ENST00000424412 413 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 PMS2P2-201ENST00000425039 1128 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 RN7SL837P-201ENST00000463010 287 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AC113935.1-201ENST00000471722 555 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 AJ011932.1-201ENST00000621707 465 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 HERC2P9-206ENST00000529624 5187 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 FAM90A7P-201ENST00000382628 1395 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 FAM90A23P-201ENST00000400136 1395 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 UBTFL8-201ENST00000426903 2112 ntBASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
RCL1Q9Y2P8 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AP006294.1-201ENST00000415407 339 ntBASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AC079178.1-201ENST00000420915 656 ntBASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 VDAC1P1-201ENST00000439229 848 ntBASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RCL1Q9Y2P8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms