RNA–Protein interactions for RNA: ENST00000329043.7

NFXL1-201, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-201ENST00000329043 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
NFXL1-201ENST00000329043 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
NFXL1-201ENST00000329043 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.11
NFXL1-201ENST00000329043 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
NFXL1-201ENST00000329043 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
NFXL1-201ENST00000329043 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
NFXL1-201ENST00000329043 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
NFXL1-201ENST00000329043 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
NFXL1-201ENST00000329043 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
NFXL1-201ENST00000329043 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
NFXL1-201ENST00000329043 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
NFXL1-201ENST00000329043 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
NFXL1-201ENST00000329043 HRCP23327 699 aa20.4■□□□□ 0.86
NFXL1-201ENST00000329043 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
NFXL1-201ENST00000329043 TTBK1Q5TCY1 1321 aaPredicted RBP20.05■□□□□ 0.8
NFXL1-201ENST00000329043 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
NFXL1-201ENST00000329043 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.78
NFXL1-201ENST00000329043 ABCC9O60706 1549 aa19.69■□□□□ 0.74
NFXL1-201ENST00000329043 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
NFXL1-201ENST00000329043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
NFXL1-201ENST00000329043 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
NFXL1-201ENST00000329043 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
NFXL1-201ENST00000329043 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
NFXL1-201ENST00000329043 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
NFXL1-201ENST00000329043 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
NFXL1-201ENST00000329043 UBTFP17480 764 aaKnown RBP19.36■□□□□ 0.69
NFXL1-201ENST00000329043 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
NFXL1-201ENST00000329043 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
NFXL1-201ENST00000329043 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
NFXL1-201ENST00000329043 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
NFXL1-201ENST00000329043 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
NFXL1-201ENST00000329043 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
NFXL1-201ENST00000329043 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
NFXL1-201ENST00000329043 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
NFXL1-201ENST00000329043 WIZO95785 1651 aa18.97■□□□□ 0.63
NFXL1-201ENST00000329043 APLP2Q06481 763 aa18.96■□□□□ 0.63
NFXL1-201ENST00000329043 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
NFXL1-201ENST00000329043 NEUROD1Q13562 356 aa18.89■□□□□ 0.62
NFXL1-201ENST00000329043 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
NFXL1-201ENST00000329043 SOGA1O94964 1423 aa18.85■□□□□ 0.61
NFXL1-201ENST00000329043 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
NFXL1-201ENST00000329043 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
NFXL1-201ENST00000329043 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
NFXL1-201ENST00000329043 ITGAEP38570 1179 aa18.8■□□□□ 0.6
NFXL1-201ENST00000329043 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.59
NFXL1-201ENST00000329043 NACADO15069 1562 aa18.76■□□□□ 0.59
NFXL1-201ENST00000329043 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
NFXL1-201ENST00000329043 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
NFXL1-201ENST00000329043 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
NFXL1-201ENST00000329043 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
NFXL1-201ENST00000329043 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
NFXL1-201ENST00000329043 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
NFXL1-201ENST00000329043 MIER1Q8N108 512 aa18.58■□□□□ 0.56
NFXL1-201ENST00000329043 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
NFXL1-201ENST00000329043 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
NFXL1-201ENST00000329043 CLIP1P30622 1438 aa18.44■□□□□ 0.54
NFXL1-201ENST00000329043 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
NFXL1-201ENST00000329043 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
NFXL1-201ENST00000329043 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
NFXL1-201ENST00000329043 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
NFXL1-201ENST00000329043 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
NFXL1-201ENST00000329043 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
NFXL1-201ENST00000329043 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
NFXL1-201ENST00000329043 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
NFXL1-201ENST00000329043 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
NFXL1-201ENST00000329043 EEA1Q15075 1411 aa18.24■□□□□ 0.51
NFXL1-201ENST00000329043 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
NFXL1-201ENST00000329043 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
NFXL1-201ENST00000329043 BCANQ96GW7 911 aa18.21■□□□□ 0.51
NFXL1-201ENST00000329043 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
NFXL1-201ENST00000329043 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
NFXL1-201ENST00000329043 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
NFXL1-201ENST00000329043 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
NFXL1-201ENST00000329043 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
NFXL1-201ENST00000329043 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
NFXL1-201ENST00000329043 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
NFXL1-201ENST00000329043 MYT1Q01538 1121 aa17.97■□□□□ 0.47
NFXL1-201ENST00000329043 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
NFXL1-201ENST00000329043 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
NFXL1-201ENST00000329043 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
NFXL1-201ENST00000329043 KIF21BO75037 1637 aa17.94■□□□□ 0.46
NFXL1-201ENST00000329043 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
NFXL1-201ENST00000329043 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
NFXL1-201ENST00000329043 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
NFXL1-201ENST00000329043 ARAP1Q96P48 1450 aa17.86■□□□□ 0.45
NFXL1-201ENST00000329043 FKBP8Q14318 412 aa17.85■□□□□ 0.45
NFXL1-201ENST00000329043 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
NFXL1-201ENST00000329043 CUX2O14529 1486 aa17.84■□□□□ 0.45
NFXL1-201ENST00000329043 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
NFXL1-201ENST00000329043 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
NFXL1-201ENST00000329043 NEFLP07196 543 aa17.8■□□□□ 0.44
NFXL1-201ENST00000329043 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
NFXL1-201ENST00000329043 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
NFXL1-201ENST00000329043 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
NFXL1-201ENST00000329043 ANP32CO43423 234 aa17.74■□□□□ 0.43
NFXL1-201ENST00000329043 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
NFXL1-201ENST00000329043 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms