Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC009145.4-201ENST00000625119 1294 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PDXDC2P-206ENST00000534700 1315 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AL354861.3-201ENST00000600140 2412 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 CAP2P1-201ENST00000557743 1390 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC009549.1-201ENST00000603468 1686 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AL583805.1-201ENST00000391389 531 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AL008707.1-201ENST00000422498 534 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 RPL8P2-201ENST00000430538 502 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC092573.1-201ENST00000433054 884 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 Z97180.1-201ENST00000445173 988 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 RPL18AP8-201ENST00000486071 528 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 MIR4754-201ENST00000582477 89 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC020922.3-201ENST00000595064 547 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AP001505.2-201ENST00000616815 443 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC020907.1-201ENST00000616460 1350 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 AC139491.6-202ENST00000637171 2077 ntBASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms