Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AC015936.1-201ENST00000591013 1028 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 PSME3-213ENST00000592169 826 ntTSL 3 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AC025165.4-201ENST00000602327 433 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 MIR7704-201ENST00000610524 59 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 NCLP1-201ENST00000445357 1963 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AQP7-207ENST00000447660 998 ntTSL 2 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AL391822.1-201ENST00000452580 562 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AC133548.2-202ENST00000562267 148 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AC104440.1-201ENST00000605010 343 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AC013472.3-201ENST00000607407 659 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AL356583.1-201ENST00000398739 1371 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 MYO15B-237ENST00000642007 4893 ntBASIC16.46■□□□□ 0.23
RC3H1Q5TC82 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RC3H1Q5TC82 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RC3H1Q5TC82 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RC3H1Q5TC82 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC16.46■□□□□ 0.22
RC3H1Q5TC82 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CICP9-201ENST00000444451 1913 ntBASIC16.45■□□□□ 0.22
RC3H1Q5TC82 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 MRPS16P3-201ENST00000415961 374 ntBASIC16.45■□□□□ 0.22
RC3H1Q5TC82 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 AC098799.1-201ENST00000504752 800 ntBASIC16.45■□□□□ 0.22
RC3H1Q5TC82 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 OR7E14P-201ENST00000526721 1000 ntBASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 DDC-206ENST00000431062 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms