Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 AL645937.6-201ENST00000641122 3727 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC073862.5-201ENST00000624129 2027 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CLDN20P56880 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CLDN20P56880 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CLDN20P56880 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CLDN20P56880 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 AC002350.2-201ENST00000623894 1828 ntBASIC12.39□□□□□ -0.43
CLDN20P56880 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 KRT18P62-201ENST00000446618 1287 ntBASIC12.39□□□□□ -0.43
CLDN20P56880 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CLDN20P56880 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
CLDN20P56880 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.39□□□□□ -0.43
CLDN20P56880 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLDN20P56880 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CLDN20P56880 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CLDN20P56880 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CLDN20P56880 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CLDN20P56880 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CLDN20P56880 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CLDN20P56880 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.38□□□□□ -0.43
CLDN20P56880 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 RPL17P11-201ENST00000417593 544 ntBASIC12.38□□□□□ -0.43
CLDN20P56880 ACTG1P19-201ENST00000418987 1116 ntBASIC12.38□□□□□ -0.43
CLDN20P56880 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.38□□□□□ -0.43
CLDN20P56880 AC012362.1-201ENST00000434906 739 ntBASIC12.38□□□□□ -0.43
CLDN20P56880 AC006529.1-201ENST00000459978 637 ntBASIC12.38□□□□□ -0.43
CLDN20P56880 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms