Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 ACTG1P17-201ENST00000558391 1119 ntBASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AC145285.5-201ENST00000562217 361 ntBASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 RN7SL665P-201ENST00000578793 300 ntBASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AC092171.5-201ENST00000608012 942 ntBASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDN22Q8N7P3 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC026320.2-201ENST00000434379 478 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC114947.1-202ENST00000514136 344 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC026803.1-201ENST00000569130 274 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC007718.1-201ENST00000621078 280 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 CTAGE13P-201ENST00000416709 2446 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 KRT18P9-201ENST00000604826 1300 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms