RNA–Protein interactions for RNA: ENST00000356541.4

ABLIM3-203, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 1 (best) BASIC

Gene ABLIM3, Length 2,290 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-203ENST00000356541 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
ABLIM3-203ENST00000356541 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
ABLIM3-203ENST00000356541 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
ABLIM3-203ENST00000356541 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
ABLIM3-203ENST00000356541 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
ABLIM3-203ENST00000356541 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
ABLIM3-203ENST00000356541 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
ABLIM3-203ENST00000356541 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
ABLIM3-203ENST00000356541 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
ABLIM3-203ENST00000356541 ABCC9O60706 1549 aa22.13■■□□□ 1.13
ABLIM3-203ENST00000356541 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
ABLIM3-203ENST00000356541 NACADO15069 1562 aa21.98■■□□□ 1.11
ABLIM3-203ENST00000356541 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
ABLIM3-203ENST00000356541 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
ABLIM3-203ENST00000356541 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
ABLIM3-203ENST00000356541 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
ABLIM3-203ENST00000356541 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
ABLIM3-203ENST00000356541 WIZO95785 1651 aa21.39■■□□□ 1.01
ABLIM3-203ENST00000356541 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
ABLIM3-203ENST00000356541 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
ABLIM3-203ENST00000356541 HRCP23327 699 aa21.32■■□□□ 1
ABLIM3-203ENST00000356541 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
ABLIM3-203ENST00000356541 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
ABLIM3-203ENST00000356541 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
ABLIM3-203ENST00000356541 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
ABLIM3-203ENST00000356541 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
ABLIM3-203ENST00000356541 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
ABLIM3-203ENST00000356541 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
ABLIM3-203ENST00000356541 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
ABLIM3-203ENST00000356541 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
ABLIM3-203ENST00000356541 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
ABLIM3-203ENST00000356541 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
ABLIM3-203ENST00000356541 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
ABLIM3-203ENST00000356541 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
ABLIM3-203ENST00000356541 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
ABLIM3-203ENST00000356541 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
ABLIM3-203ENST00000356541 EEA1Q15075 1411 aa20.64■□□□□ 0.89
ABLIM3-203ENST00000356541 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
ABLIM3-203ENST00000356541 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
ABLIM3-203ENST00000356541 SOGA1O94964 1423 aa20.58■□□□□ 0.89
ABLIM3-203ENST00000356541 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ABLIM3-203ENST00000356541 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
ABLIM3-203ENST00000356541 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
ABLIM3-203ENST00000356541 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
ABLIM3-203ENST00000356541 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
ABLIM3-203ENST00000356541 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
ABLIM3-203ENST00000356541 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
ABLIM3-203ENST00000356541 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
ABLIM3-203ENST00000356541 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
ABLIM3-203ENST00000356541 KIF21BO75037 1637 aa20.35■□□□□ 0.85
ABLIM3-203ENST00000356541 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
ABLIM3-203ENST00000356541 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
ABLIM3-203ENST00000356541 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
ABLIM3-203ENST00000356541 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
ABLIM3-203ENST00000356541 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
ABLIM3-203ENST00000356541 CLIP1P30622 1438 aa20.14■□□□□ 0.82
ABLIM3-203ENST00000356541 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
ABLIM3-203ENST00000356541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
ABLIM3-203ENST00000356541 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
ABLIM3-203ENST00000356541 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
ABLIM3-203ENST00000356541 CFTRP13569 1480 aa20.07■□□□□ 0.8
ABLIM3-203ENST00000356541 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
ABLIM3-203ENST00000356541 CUX1P39880 1505 aa20.05■□□□□ 0.8
ABLIM3-203ENST00000356541 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
ABLIM3-203ENST00000356541 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
ABLIM3-203ENST00000356541 PRXQ9BXM0 1461 aa20■□□□□ 0.79
ABLIM3-203ENST00000356541 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
ABLIM3-203ENST00000356541 APLP2Q06481 763 aa19.93■□□□□ 0.78
ABLIM3-203ENST00000356541 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
ABLIM3-203ENST00000356541 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
ABLIM3-203ENST00000356541 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
ABLIM3-203ENST00000356541 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
ABLIM3-203ENST00000356541 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
ABLIM3-203ENST00000356541 CUX2O14529 1486 aa19.75■□□□□ 0.75
ABLIM3-203ENST00000356541 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
ABLIM3-203ENST00000356541 IGF1RP08069 1367 aa19.7■□□□□ 0.74
ABLIM3-203ENST00000356541 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
ABLIM3-203ENST00000356541 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
ABLIM3-203ENST00000356541 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
ABLIM3-203ENST00000356541 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
ABLIM3-203ENST00000356541 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
ABLIM3-203ENST00000356541 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
ABLIM3-203ENST00000356541 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
ABLIM3-203ENST00000356541 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
ABLIM3-203ENST00000356541 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
ABLIM3-203ENST00000356541 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
ABLIM3-203ENST00000356541 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
ABLIM3-203ENST00000356541 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 NESP48681 1621 aa19.48■□□□□ 0.71
ABLIM3-203ENST00000356541 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
ABLIM3-203ENST00000356541 CUL7Q14999 1698 aa19.46■□□□□ 0.71
ABLIM3-203ENST00000356541 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
ABLIM3-203ENST00000356541 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
ABLIM3-203ENST00000356541 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms