Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSR1P43307 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 AC138761.6-201ENST00000583997 1423 ntBASIC14.5□□□□□ -0.09
SSR1P43307 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 AC007279.1-201ENST00000448547 837 ntBASIC14.5□□□□□ -0.09
SSR1P43307 SPTLC1P5-201ENST00000450718 252 ntBASIC14.5□□□□□ -0.09
SSR1P43307 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 SCARNA20.5-201ENST00000516991 142 ntBASIC14.5□□□□□ -0.09
SSR1P43307 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.5□□□□□ -0.09
SSR1P43307 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.5□□□□□ -0.09
SSR1P43307 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 AC145285.5-201ENST00000562217 361 ntBASIC14.5□□□□□ -0.09
SSR1P43307 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SSR1P43307 RN7SL774P-201ENST00000577467 290 ntBASIC14.5□□□□□ -0.09
SSR1P43307 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 MIR6869-201ENST00000619434 62 ntBASIC14.5□□□□□ -0.09
SSR1P43307 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
SSR1P43307 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.5□□□□□ -0.09
SSR1P43307 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC14.5□□□□□ -0.09
SSR1P43307 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSR1P43307 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SSR1P43307 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 AC060814.4-201ENST00000594169 2163 ntBASIC14.49□□□□□ -0.09
SSR1P43307 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 MIR769-201ENST00000390225 118 ntBASIC14.49□□□□□ -0.09
SSR1P43307 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 AC026320.2-201ENST00000434379 478 ntBASIC14.49□□□□□ -0.09
SSR1P43307 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.49□□□□□ -0.09
SSR1P43307 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR1P43307 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR1P43307 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR1P43307 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SSR1P43307 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR1P43307 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 MIR3940-201ENST00000579148 102 ntBASIC14.49□□□□□ -0.09
SSR1P43307 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR1P43307 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR1P43307 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SSR1P43307 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 PES1P2-201ENST00000449745 1735 ntBASIC14.49□□□□□ -0.09
SSR1P43307 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SSR1P43307 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR1P43307 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR1P43307 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR1P43307 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SSR1P43307 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms