Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 AP002353.1-201ENST00000528257 1599 ntBASIC11.95□□□□□ -0.5
AP3S1Q92572 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.95□□□□□ -0.5
AP3S1Q92572 PCDHA9-201ENST00000378122 6900 ntBASIC11.95□□□□□ -0.5
AP3S1Q92572 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 DGKZP1-201ENST00000378718 2776 ntBASIC11.95□□□□□ -0.5
AP3S1Q92572 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S1Q92572 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S1Q92572 E2F3P2-201ENST00000447755 1422 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC244394.1-201ENST00000435000 1665 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
AP3S1Q92572 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC087499.6-201ENST00000411576 835 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 FAM58BP-201ENST00000439056 645 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S1Q92572 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC025279.2-201ENST00000569730 653 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AL591926.3-201ENST00000611630 238 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
AP3S1Q92572 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 AC099521.2-201ENST00000619354 2036 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 KRT8P4-201ENST00000509735 1454 ntBASIC11.94□□□□□ -0.5
AP3S1Q92572 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
AP3S1Q92572 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
AP3S1Q92572 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S1Q92572 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S1Q92572 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S1Q92572 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
AP3S1Q92572 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S1Q92572 TNKS-213ENST00000522110 2900 ntBASIC11.93□□□□□ -0.5
AP3S1Q92572 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms