Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC026271.4-201ENST00000578214 1833 ntBASIC14.54□□□□□ -0.08
SSR1P43307 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 AC245140.2-201ENST00000624054 1939 ntBASIC14.54□□□□□ -0.08
SSR1P43307 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
SSR1P43307 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SSR1P43307 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSR1P43307 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSR1P43307 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 AC115284.2-201ENST00000624646 2054 ntBASIC14.53□□□□□ -0.08
SSR1P43307 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 AC002350.2-201ENST00000623894 1828 ntBASIC14.53□□□□□ -0.08
SSR1P43307 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 RCC2P5-201ENST00000492126 1487 ntBASIC14.53□□□□□ -0.08
SSR1P43307 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.53□□□□□ -0.08
SSR1P43307 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 MIR645-201ENST00000385283 94 ntBASIC14.53□□□□□ -0.08
SSR1P43307 ELK2AP-201ENST00000392510 1007 ntBASIC14.53□□□□□ -0.08
SSR1P43307 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 RPSAP15-201ENST00000448168 861 ntBASIC14.53□□□□□ -0.08
SSR1P43307 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 AC008723.1-201ENST00000506922 207 ntBASIC14.53□□□□□ -0.08
SSR1P43307 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 KLF17P1-201ENST00000547105 1126 ntBASIC14.53□□□□□ -0.08
SSR1P43307 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 AC132825.4-202ENST00000578792 434 ntBASIC14.53□□□□□ -0.08
SSR1P43307 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SSR1P43307 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.53□□□□□ -0.08
SSR1P43307 EGLN3-205ENST00000547327 2849 ntBASIC14.53□□□□□ -0.08
SSR1P43307 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.53□□□□□ -0.08
SSR1P43307 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SSR1P43307 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SSR1P43307 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 AC104758.3-203ENST00000562938 2123 ntBASIC14.53□□□□□ -0.08
SSR1P43307 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSR1P43307 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC14.52□□□□□ -0.08
SSR1P43307 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.52□□□□□ -0.08
SSR1P43307 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SSR1P43307 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 DLX4-206ENST00000611342 1662 ntBASIC14.52□□□□□ -0.08
SSR1P43307 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 BEND3P3-201ENST00000611030 2440 ntBASIC14.52□□□□□ -0.08
SSR1P43307 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms