RNA–Protein interactions for RNA: ENST00000334956.12

PARVA-201, Transcript of parvin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVA, Length 4,458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVA-201ENST00000334956 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
PARVA-201ENST00000334956 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PARVA-201ENST00000334956 ABCC9O60706 1549 aa23.05■■□□□ 1.28
PARVA-201ENST00000334956 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.27
PARVA-201ENST00000334956 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
PARVA-201ENST00000334956 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
PARVA-201ENST00000334956 CCDC180Q9P1Z9 1646 aa21.71■■□□□ 1.07
PARVA-201ENST00000334956 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
PARVA-201ENST00000334956 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
PARVA-201ENST00000334956 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
PARVA-201ENST00000334956 SCRIBQ14160 1630 aa21.3■■□□□ 1
PARVA-201ENST00000334956 NACADO15069 1562 aa21.16■□□□□ 0.98
PARVA-201ENST00000334956 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
PARVA-201ENST00000334956 RANGAP1P46060 587 aaPredicted RBP21.1■□□□□ 0.97
PARVA-201ENST00000334956 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
PARVA-201ENST00000334956 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
PARVA-201ENST00000334956 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
PARVA-201ENST00000334956 FBLN2P98095 1184 aa20.93■□□□□ 0.94
PARVA-201ENST00000334956 APLP2Q06481 763 aa20.87■□□□□ 0.93
PARVA-201ENST00000334956 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
PARVA-201ENST00000334956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
PARVA-201ENST00000334956 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
PARVA-201ENST00000334956 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
PARVA-201ENST00000334956 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
PARVA-201ENST00000334956 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
PARVA-201ENST00000334956 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
PARVA-201ENST00000334956 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
PARVA-201ENST00000334956 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
PARVA-201ENST00000334956 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
PARVA-201ENST00000334956 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
PARVA-201ENST00000334956 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
PARVA-201ENST00000334956 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
PARVA-201ENST00000334956 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
PARVA-201ENST00000334956 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
PARVA-201ENST00000334956 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
PARVA-201ENST00000334956 SMARCA2P51531 1590 aa20■□□□□ 0.79
PARVA-201ENST00000334956 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
PARVA-201ENST00000334956 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
PARVA-201ENST00000334956 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
PARVA-201ENST00000334956 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
PARVA-201ENST00000334956 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
PARVA-201ENST00000334956 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
PARVA-201ENST00000334956 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
PARVA-201ENST00000334956 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
PARVA-201ENST00000334956 ITGAEP38570 1179 aa19.76■□□□□ 0.75
PARVA-201ENST00000334956 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
PARVA-201ENST00000334956 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
PARVA-201ENST00000334956 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
PARVA-201ENST00000334956 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
PARVA-201ENST00000334956 CDK11AQ9UQ88 783 aaPredicted RBP19.68■□□□□ 0.74
PARVA-201ENST00000334956 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
PARVA-201ENST00000334956 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
PARVA-201ENST00000334956 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
PARVA-201ENST00000334956 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
PARVA-201ENST00000334956 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
PARVA-201ENST00000334956 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
PARVA-201ENST00000334956 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
PARVA-201ENST00000334956 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
PARVA-201ENST00000334956 KCNH8Q96L42 1107 aa19.58■□□□□ 0.73
PARVA-201ENST00000334956 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
PARVA-201ENST00000334956 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
PARVA-201ENST00000334956 SOGA1O94964 1423 aa19.52■□□□□ 0.72
PARVA-201ENST00000334956 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
PARVA-201ENST00000334956 FAM50AQ14320 339 aaKnown RBP19.5■□□□□ 0.71
PARVA-201ENST00000334956 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
PARVA-201ENST00000334956 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
PARVA-201ENST00000334956 WIZO95785 1651 aa19.46■□□□□ 0.71
PARVA-201ENST00000334956 CUX2O14529 1486 aa19.43■□□□□ 0.7
PARVA-201ENST00000334956 PCGF6Q9BYE7 350 aa19.4■□□□□ 0.7
PARVA-201ENST00000334956 NESP48681 1621 aa19.39■□□□□ 0.7
PARVA-201ENST00000334956 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
PARVA-201ENST00000334956 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
PARVA-201ENST00000334956 PLEKHD1A6NEE1 506 aa19.36■□□□□ 0.69
PARVA-201ENST00000334956 BCANQ96GW7 911 aa19.35■□□□□ 0.69
PARVA-201ENST00000334956 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
PARVA-201ENST00000334956 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
PARVA-201ENST00000334956 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
PARVA-201ENST00000334956 STAG3Q9UJ98 1225 aa19.2■□□□□ 0.66
PARVA-201ENST00000334956 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
PARVA-201ENST00000334956 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
PARVA-201ENST00000334956 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
PARVA-201ENST00000334956 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
PARVA-201ENST00000334956 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
PARVA-201ENST00000334956 CCER1Q8TC90 406 aaPredicted RBP19.15■□□□□ 0.66
PARVA-201ENST00000334956 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
PARVA-201ENST00000334956 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
PARVA-201ENST00000334956 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
PARVA-201ENST00000334956 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.65
PARVA-201ENST00000334956 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.65
PARVA-201ENST00000334956 EEA1Q15075 1411 aa19.07■□□□□ 0.64
PARVA-201ENST00000334956 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
PARVA-201ENST00000334956 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
PARVA-201ENST00000334956 CFTRP13569 1480 aa19.05■□□□□ 0.64
PARVA-201ENST00000334956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
PARVA-201ENST00000334956 MLECQ14165 292 aa19.03■□□□□ 0.64
PARVA-201ENST00000334956 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
PARVA-201ENST00000334956 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
PARVA-201ENST00000334956 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
PARVA-201ENST00000334956 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
PARVA-201ENST00000334956 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms