RNA–Protein interactions for RNA: ENST00000610569.1

PCDHGA8-202, Transcript of protocadherin gamma subfamily A, 8, humanhuman

APPRIS P1 BASIC

Gene PCDHGA8, Length 6,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-202ENST00000610569 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
PCDHGA8-202ENST00000610569 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
PCDHGA8-202ENST00000610569 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
PCDHGA8-202ENST00000610569 SHROOM4Q9ULL8 1493 aa19.74■□□□□ 0.75
PCDHGA8-202ENST00000610569 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.74
PCDHGA8-202ENST00000610569 APLP2Q06481 763 aa19.5■□□□□ 0.71
PCDHGA8-202ENST00000610569 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
PCDHGA8-202ENST00000610569 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
PCDHGA8-202ENST00000610569 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
PCDHGA8-202ENST00000610569 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
PCDHGA8-202ENST00000610569 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
PCDHGA8-202ENST00000610569 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
PCDHGA8-202ENST00000610569 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.61
PCDHGA8-202ENST00000610569 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
PCDHGA8-202ENST00000610569 CENPBP07199 599 aaPredicted RBP18.76■□□□□ 0.59
PCDHGA8-202ENST00000610569 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
PCDHGA8-202ENST00000610569 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
PCDHGA8-202ENST00000610569 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
PCDHGA8-202ENST00000610569 NEFLP07196 543 aa18.52■□□□□ 0.56
PCDHGA8-202ENST00000610569 YTHDC1Q96MU7 727 aaKnown RBP18.44■□□□□ 0.54
PCDHGA8-202ENST00000610569 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
PCDHGA8-202ENST00000610569 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
PCDHGA8-202ENST00000610569 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
PCDHGA8-202ENST00000610569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
PCDHGA8-202ENST00000610569 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
PCDHGA8-202ENST00000610569 ITGAEP38570 1179 aa18.13■□□□□ 0.49
PCDHGA8-202ENST00000610569 DAXXQ9UER7 740 aaPredicted RBP18.12■□□□□ 0.49
PCDHGA8-202ENST00000610569 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
PCDHGA8-202ENST00000610569 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
PCDHGA8-202ENST00000610569 MYT1Q01538 1121 aa17.97■□□□□ 0.47
PCDHGA8-202ENST00000610569 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
PCDHGA8-202ENST00000610569 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
PCDHGA8-202ENST00000610569 HRCP23327 699 aa17.79■□□□□ 0.44
PCDHGA8-202ENST00000610569 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
PCDHGA8-202ENST00000610569 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
PCDHGA8-202ENST00000610569 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
PCDHGA8-202ENST00000610569 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
PCDHGA8-202ENST00000610569 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
PCDHGA8-202ENST00000610569 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
PCDHGA8-202ENST00000610569 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
PCDHGA8-202ENST00000610569 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
PCDHGA8-202ENST00000610569 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
PCDHGA8-202ENST00000610569 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
PCDHGA8-202ENST00000610569 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
PCDHGA8-202ENST00000610569 BCANQ96GW7 911 aa17.33■□□□□ 0.37
PCDHGA8-202ENST00000610569 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
PCDHGA8-202ENST00000610569 FBLN2P98095 1184 aa17.32■□□□□ 0.36
PCDHGA8-202ENST00000610569 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHGA8-202ENST00000610569 ANP32CO43423 234 aa17.28■□□□□ 0.36
PCDHGA8-202ENST00000610569 CANXP27824 592 aaKnown RBP17.26■□□□□ 0.35
PCDHGA8-202ENST00000610569 NEFMP07197 916 aa17.2■□□□□ 0.34
PCDHGA8-202ENST00000610569 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
PCDHGA8-202ENST00000610569 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
PCDHGA8-202ENST00000610569 ABCC9O60706 1549 aa17.12■□□□□ 0.33
PCDHGA8-202ENST00000610569 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
PCDHGA8-202ENST00000610569 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
PCDHGA8-202ENST00000610569 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA8-202ENST00000610569 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
PCDHGA8-202ENST00000610569 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
PCDHGA8-202ENST00000610569 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
PCDHGA8-202ENST00000610569 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
PCDHGA8-202ENST00000610569 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
PCDHGA8-202ENST00000610569 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
PCDHGA8-202ENST00000610569 HSP90AA1P07900 732 aaKnown RBP16.85■□□□□ 0.29
PCDHGA8-202ENST00000610569 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
PCDHGA8-202ENST00000610569 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
PCDHGA8-202ENST00000610569 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHGA8-202ENST00000610569 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
PCDHGA8-202ENST00000610569 UPF2Q9HAU5 1272 aaKnown RBP16.75■□□□□ 0.27
PCDHGA8-202ENST00000610569 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
PCDHGA8-202ENST00000610569 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
PCDHGA8-202ENST00000610569 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
PCDHGA8-202ENST00000610569 FKBP8Q14318 412 aa16.72■□□□□ 0.27
PCDHGA8-202ENST00000610569 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHGA8-202ENST00000610569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHGA8-202ENST00000610569 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
PCDHGA8-202ENST00000610569 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
PCDHGA8-202ENST00000610569 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
PCDHGA8-202ENST00000610569 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
PCDHGA8-202ENST00000610569 A0A0G2JS52 829 aa16.62■□□□□ 0.25
PCDHGA8-202ENST00000610569 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
PCDHGA8-202ENST00000610569 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
PCDHGA8-202ENST00000610569 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCDHGA8-202ENST00000610569 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
PCDHGA8-202ENST00000610569 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
PCDHGA8-202ENST00000610569 ARXQ96QS3 562 aa16.54■□□□□ 0.24
PCDHGA8-202ENST00000610569 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
PCDHGA8-202ENST00000610569 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
PCDHGA8-202ENST00000610569 TSPY4P0CV99 314 aa16.52■□□□□ 0.24
PCDHGA8-202ENST00000610569 TSPY10P0CW01 314 aa16.52■□□□□ 0.24
PCDHGA8-202ENST00000610569 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA8-202ENST00000610569 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
PCDHGA8-202ENST00000610569 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
PCDHGA8-202ENST00000610569 NBR1Q14596 966 aa16.48■□□□□ 0.23
PCDHGA8-202ENST00000610569 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
PCDHGA8-202ENST00000610569 CDK11BP21127 795 aaKnown RBP16.47■□□□□ 0.23
PCDHGA8-202ENST00000610569 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA8-202ENST00000610569 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
PCDHGA8-202ENST00000610569 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
PCDHGA8-202ENST00000610569 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms