Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.13□□□□□ -0.15
MTHFRP42898 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.13□□□□□ -0.15
MTHFRP42898 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.13□□□□□ -0.15
MTHFRP42898 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC14.13□□□□□ -0.15
MTHFRP42898 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.13□□□□□ -0.15
MTHFRP42898 BAP1-211ENST00000615113 489 ntBASIC14.13□□□□□ -0.15
MTHFRP42898 AC148476.1-201ENST00000622182 705 ntBASIC14.13□□□□□ -0.15
MTHFRP42898 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.13□□□□□ -0.15
MTHFRP42898 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
MTHFRP42898 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MTHFRP42898 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MTHFRP42898 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.12□□□□□ -0.15
MTHFRP42898 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.12□□□□□ -0.15
MTHFRP42898 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 AC006328.1-201ENST00000437571 379 ntBASIC14.12□□□□□ -0.15
MTHFRP42898 RN7SL173P-201ENST00000461853 292 ntBASIC14.12□□□□□ -0.15
MTHFRP42898 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.12□□□□□ -0.15
MTHFRP42898 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.12□□□□□ -0.15
MTHFRP42898 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.12□□□□□ -0.15
MTHFRP42898 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 RN7SL478P-201ENST00000584358 298 ntBASIC14.12□□□□□ -0.15
MTHFRP42898 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.12□□□□□ -0.15
MTHFRP42898 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 AC024075.2-201ENST00000598112 1473 ntBASIC14.12□□□□□ -0.15
MTHFRP42898 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
MTHFRP42898 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MTHFRP42898 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MTHFRP42898 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
MTHFRP42898 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.11□□□□□ -0.15
MTHFRP42898 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.11□□□□□ -0.15
MTHFRP42898 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.11□□□□□ -0.15
MTHFRP42898 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AC022447.5-201ENST00000504817 392 ntBASIC14.11□□□□□ -0.15
MTHFRP42898 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.11□□□□□ -0.15
MTHFRP42898 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MTHFRP42898 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.11□□□□□ -0.15
MTHFRP42898 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.11□□□□□ -0.15
MTHFRP42898 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms