Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.11□□□□□ -0.47
ALX3O95076 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.11□□□□□ -0.47
ALX3O95076 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 AC243960.2-201ENST00000600996 747 ntBASIC12.11□□□□□ -0.47
ALX3O95076 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC12.11□□□□□ -0.47
ALX3O95076 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.11□□□□□ -0.47
ALX3O95076 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ALX3O95076 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.11□□□□□ -0.47
ALX3O95076 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.11□□□□□ -0.47
ALX3O95076 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALX3O95076 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 AC093462.1-201ENST00000621167 1683 ntBASIC12.1□□□□□ -0.47
ALX3O95076 AC040160.2-201ENST00000623816 1675 ntBASIC12.1□□□□□ -0.47
ALX3O95076 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.1□□□□□ -0.47
ALX3O95076 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
ALX3O95076 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.1□□□□□ -0.47
ALX3O95076 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.1□□□□□ -0.47
ALX3O95076 AC078875.1-201ENST00000431907 724 ntBASIC12.1□□□□□ -0.47
ALX3O95076 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 RPL18P13-201ENST00000478088 569 ntBASIC12.1□□□□□ -0.47
ALX3O95076 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.1□□□□□ -0.47
ALX3O95076 AL583810.1-201ENST00000553344 1045 ntBASIC12.1□□□□□ -0.47
ALX3O95076 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 MIR3615-201ENST00000581999 87 ntBASIC12.1□□□□□ -0.47
ALX3O95076 AC008805.1-201ENST00000590892 364 ntBASIC12.1□□□□□ -0.47
ALX3O95076 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 BNIP3P13-201ENST00000599968 566 ntBASIC12.1□□□□□ -0.47
ALX3O95076 AL356740.1-201ENST00000602192 1297 ntBASIC12.1□□□□□ -0.47
ALX3O95076 AC092299.1-201ENST00000632679 757 ntBASIC12.1□□□□□ -0.47
ALX3O95076 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
ALX3O95076 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.1□□□□□ -0.47
ALX3O95076 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALX3O95076 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms