RNA–Protein interactions for RNA: ENST00000377899.5

PCSK2-202, Transcript of proprotein convertase subtilisin/kexin type 2, humanhuman

TSL 1 (best) BASIC

Gene PCSK2, Length 4,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK2-202ENST00000377899 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
PCSK2-202ENST00000377899 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
PCSK2-202ENST00000377899 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
PCSK2-202ENST00000377899 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
PCSK2-202ENST00000377899 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
PCSK2-202ENST00000377899 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
PCSK2-202ENST00000377899 HRCP23327 699 aa19.92■□□□□ 0.78
PCSK2-202ENST00000377899 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
PCSK2-202ENST00000377899 MYT1Q01538 1121 aa19.58■□□□□ 0.72
PCSK2-202ENST00000377899 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
PCSK2-202ENST00000377899 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
PCSK2-202ENST00000377899 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
PCSK2-202ENST00000377899 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
PCSK2-202ENST00000377899 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
PCSK2-202ENST00000377899 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
PCSK2-202ENST00000377899 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
PCSK2-202ENST00000377899 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
PCSK2-202ENST00000377899 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
PCSK2-202ENST00000377899 APLP2Q06481 763 aa18.97■□□□□ 0.63
PCSK2-202ENST00000377899 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
PCSK2-202ENST00000377899 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
PCSK2-202ENST00000377899 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
PCSK2-202ENST00000377899 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
PCSK2-202ENST00000377899 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
PCSK2-202ENST00000377899 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
PCSK2-202ENST00000377899 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
PCSK2-202ENST00000377899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
PCSK2-202ENST00000377899 ERICH6Q7L0X2 663 aa18.54■□□□□ 0.56
PCSK2-202ENST00000377899 NEFLP07196 543 aa18.49■□□□□ 0.55
PCSK2-202ENST00000377899 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
PCSK2-202ENST00000377899 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
PCSK2-202ENST00000377899 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
PCSK2-202ENST00000377899 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
PCSK2-202ENST00000377899 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
PCSK2-202ENST00000377899 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
PCSK2-202ENST00000377899 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
PCSK2-202ENST00000377899 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
PCSK2-202ENST00000377899 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
PCSK2-202ENST00000377899 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
PCSK2-202ENST00000377899 ITGAEP38570 1179 aa17.92■□□□□ 0.46
PCSK2-202ENST00000377899 BCANQ96GW7 911 aa17.85■□□□□ 0.45
PCSK2-202ENST00000377899 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
PCSK2-202ENST00000377899 MIER1Q8N108 512 aa17.79■□□□□ 0.44
PCSK2-202ENST00000377899 CDK11AQ9UQ88 783 aaPredicted RBP17.72■□□□□ 0.43
PCSK2-202ENST00000377899 ANP32CO43423 234 aa17.71■□□□□ 0.42
PCSK2-202ENST00000377899 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
PCSK2-202ENST00000377899 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
PCSK2-202ENST00000377899 FKBP8Q14318 412 aa17.63■□□□□ 0.41
PCSK2-202ENST00000377899 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
PCSK2-202ENST00000377899 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
PCSK2-202ENST00000377899 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
PCSK2-202ENST00000377899 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
PCSK2-202ENST00000377899 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
PCSK2-202ENST00000377899 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
PCSK2-202ENST00000377899 EEA1Q15075 1411 aa17.46■□□□□ 0.39
PCSK2-202ENST00000377899 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
PCSK2-202ENST00000377899 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
PCSK2-202ENST00000377899 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
PCSK2-202ENST00000377899 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
PCSK2-202ENST00000377899 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
PCSK2-202ENST00000377899 ABCC9O60706 1549 aa17.4■□□□□ 0.38
PCSK2-202ENST00000377899 CLIP1P30622 1438 aa17.37■□□□□ 0.37
PCSK2-202ENST00000377899 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
PCSK2-202ENST00000377899 ANP32AP39687 249 aaKnown RBP17.35■□□□□ 0.37
PCSK2-202ENST00000377899 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
PCSK2-202ENST00000377899 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
PCSK2-202ENST00000377899 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCSK2-202ENST00000377899 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
PCSK2-202ENST00000377899 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
PCSK2-202ENST00000377899 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCSK2-202ENST00000377899 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
PCSK2-202ENST00000377899 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
PCSK2-202ENST00000377899 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
PCSK2-202ENST00000377899 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
PCSK2-202ENST00000377899 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
PCSK2-202ENST00000377899 NBR1Q14596 966 aa17.1■□□□□ 0.33
PCSK2-202ENST00000377899 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.32
PCSK2-202ENST00000377899 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
PCSK2-202ENST00000377899 CCDC136Q96JN2 1154 aa17.06■□□□□ 0.32
PCSK2-202ENST00000377899 SOGA1O94964 1423 aa17.06■□□□□ 0.32
PCSK2-202ENST00000377899 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
PCSK2-202ENST00000377899 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
PCSK2-202ENST00000377899 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
PCSK2-202ENST00000377899 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
PCSK2-202ENST00000377899 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
PCSK2-202ENST00000377899 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
PCSK2-202ENST00000377899 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
PCSK2-202ENST00000377899 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
PCSK2-202ENST00000377899 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
PCSK2-202ENST00000377899 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
PCSK2-202ENST00000377899 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
PCSK2-202ENST00000377899 NACADO15069 1562 aa16.96■□□□□ 0.31
PCSK2-202ENST00000377899 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
PCSK2-202ENST00000377899 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
PCSK2-202ENST00000377899 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
PCSK2-202ENST00000377899 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
PCSK2-202ENST00000377899 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCSK2-202ENST00000377899 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
PCSK2-202ENST00000377899 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
PCSK2-202ENST00000377899 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms