Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.46□□□□□ -0.09
O00370 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.46□□□□□ -0.09
O00370 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.46□□□□□ -0.09
O00370 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
O00370 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 AC026120.2-201ENST00000617239 309 ntBASIC14.46□□□□□ -0.09
O00370 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
O00370 AC092115.1-201ENST00000566277 1402 ntBASIC14.46□□□□□ -0.09
O00370 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
O00370 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.46□□□□□ -0.09
O00370 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
O00370 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.46□□□□□ -0.1
O00370 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.46□□□□□ -0.1
O00370 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
O00370 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
O00370 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.46□□□□□ -0.1
O00370 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
O00370 KRT8P42-201ENST00000405771 1399 ntBASIC14.46□□□□□ -0.1
O00370 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
O00370 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
O00370 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.46□□□□□ -0.1
O00370 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.46□□□□□ -0.1
O00370 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
O00370 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
O00370 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
O00370 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 CICP9-201ENST00000444451 1913 ntBASIC14.45□□□□□ -0.1
O00370 GHET1-201ENST00000627071 1906 ntBASIC14.45□□□□□ -0.1
O00370 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
O00370 AL645937.6-201ENST00000641122 3727 ntBASIC14.45□□□□□ -0.1
O00370 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.45□□□□□ -0.1
O00370 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.45□□□□□ -0.1
O00370 ACTG1P19-201ENST00000418987 1116 ntBASIC14.45□□□□□ -0.1
O00370 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
O00370 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.45□□□□□ -0.1
O00370 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.45□□□□□ -0.1
O00370 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
O00370 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 PIGCP1-201ENST00000527583 895 ntBASIC14.45□□□□□ -0.1
O00370 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.45□□□□□ -0.1
O00370 AC226150.1-201ENST00000544259 466 ntBASIC14.45□□□□□ -0.1
O00370 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.45□□□□□ -0.1
O00370 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 MIR4706-201ENST00000582134 82 ntBASIC14.45□□□□□ -0.1
O00370 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.45□□□□□ -0.1
O00370 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
O00370 AC002044.2-201ENST00000624910 970 ntBASIC14.45□□□□□ -0.1
O00370 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.45□□□□□ -0.1
O00370 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
O00370 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.45□□□□□ -0.1
O00370 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 AL365181.1-201ENST00000564032 1828 ntBASIC14.45□□□□□ -0.1
O00370 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
O00370 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
O00370 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
O00370 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
O00370 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
O00370 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms