Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SSR1P43307 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SSR1P43307 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.58□□□□□ -0.08
SSR1P43307 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR1P43307 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 TBC1D27-202ENST00000424239 1573 ntBASIC14.57□□□□□ -0.08
SSR1P43307 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SSR1P43307 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SSR1P43307 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.57□□□□□ -0.08
SSR1P43307 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.57□□□□□ -0.08
SSR1P43307 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.57□□□□□ -0.08
SSR1P43307 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.57□□□□□ -0.08
SSR1P43307 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.57□□□□□ -0.08
SSR1P43307 NDUFB10P1-201ENST00000567319 521 ntBASIC14.57□□□□□ -0.08
SSR1P43307 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.57□□□□□ -0.08
SSR1P43307 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.57□□□□□ -0.08
SSR1P43307 MIR4538-201ENST00000581377 78 ntBASIC14.57□□□□□ -0.08
SSR1P43307 LINC01783-202ENST00000614408 828 ntBASIC14.57□□□□□ -0.08
SSR1P43307 BX284668.2-205ENST00000619677 828 ntBASIC14.57□□□□□ -0.08
SSR1P43307 AC100757.4-201ENST00000626934 759 ntBASIC14.57□□□□□ -0.08
SSR1P43307 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSR1P43307 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSR1P43307 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 AC040160.2-201ENST00000623816 1675 ntBASIC14.56□□□□□ -0.08
SSR1P43307 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 FAM86MP-201ENST00000340703 885 ntBASIC14.56□□□□□ -0.08
SSR1P43307 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 ISCA2P1-201ENST00000425548 448 ntBASIC14.56□□□□□ -0.08
SSR1P43307 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 AC005722.1-201ENST00000431878 964 ntBASIC14.56□□□□□ -0.08
SSR1P43307 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.56□□□□□ -0.08
SSR1P43307 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 POU5F1P2-201ENST00000521750 823 ntBASIC14.56□□□□□ -0.08
SSR1P43307 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.56□□□□□ -0.08
SSR1P43307 AL133467.4-201ENST00000602953 725 ntBASIC14.56□□□□□ -0.08
SSR1P43307 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.56□□□□□ -0.08
SSR1P43307 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 594.5 ms