Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.51□□□□□ -0.57
CTRB1P17538 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.51□□□□□ -0.57
CTRB1P17538 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 AL161932.2-201ENST00000435436 679 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.51□□□□□ -0.57
CTRB1P17538 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.51□□□□□ -0.57
CTRB1P17538 CNN2P10-201ENST00000443067 918 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 GAPDHP21-201ENST00000450301 1010 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.51□□□□□ -0.57
CTRB1P17538 AC079316.1-201ENST00000548397 411 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.51□□□□□ -0.57
CTRB1P17538 AL136301.1-201ENST00000615830 422 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.51□□□□□ -0.57
CTRB1P17538 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CTRB1P17538 AC009533.1-201ENST00000539757 3158 ntBASIC11.51□□□□□ -0.57
CTRB1P17538 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 PDIA3P1-201ENST00000471856 1510 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CTRB1P17538 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.5□□□□□ -0.57
CTRB1P17538 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.5□□□□□ -0.57
CTRB1P17538 HOMER2P2-201ENST00000451621 847 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.5□□□□□ -0.57
CTRB1P17538 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.5□□□□□ -0.57
CTRB1P17538 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.5□□□□□ -0.57
CTRB1P17538 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.5□□□□□ -0.57
CTRB1P17538 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 AC104506.1-201ENST00000609247 429 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 TUBB8P4-201ENST00000511806 1324 ntBASIC11.5□□□□□ -0.57
CTRB1P17538 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC11.5□□□□□ -0.57
CTRB1P17538 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CTRB1P17538 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC11.5□□□□□ -0.57
CTRB1P17538 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms