Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 AC016575.1-201ENST00000607026 382 ntBASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.34■■□□□ 1.49
KCNF1Q9H3M0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNF1Q9H3M0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.33■■□□□ 1.49
KCNF1Q9H3M0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KCNF1Q9H3M0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KCNF1Q9H3M0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
KCNF1Q9H3M0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
KCNF1Q9H3M0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
KCNF1Q9H3M0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 AC092667.1-201ENST00000434301 2586 ntBASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
KCNF1Q9H3M0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KCNF1Q9H3M0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KCNF1Q9H3M0 AL157384.1-201ENST00000445995 2473 ntBASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
KCNF1Q9H3M0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 RPS2P7-201ENST00000447334 885 ntBASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNF1Q9H3M0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms