Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 RAP2CP1-201ENST00000605103 478 ntBASIC21.6■■□□□ 1.05
CDC6Q99741 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC6Q99741 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC6Q99741 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CDC6Q99741 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC6Q99741 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.59■■□□□ 1.05
CDC6Q99741 CDCA4P2-201ENST00000441182 718 ntBASIC21.59■■□□□ 1.05
CDC6Q99741 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDC6Q99741 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC6Q99741 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC6Q99741 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC6Q99741 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC6Q99741 AC073111.5-205ENST00000641717 521 ntBASIC21.59■■□□□ 1.05
CDC6Q99741 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC6Q99741 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CDC6Q99741 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC6Q99741 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.58■■□□□ 1.05
CDC6Q99741 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC6Q99741 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CDC6Q99741 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC6Q99741 AC026185.1-201ENST00000445748 174 ntBASIC21.58■■□□□ 1.05
CDC6Q99741 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.58■■□□□ 1.05
CDC6Q99741 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CDC6Q99741 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC6Q99741 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.58■■□□□ 1.05
CDC6Q99741 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC6Q99741 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC6Q99741 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC6Q99741 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC6Q99741 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.58■■□□□ 1.05
CDC6Q99741 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC6Q99741 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC6Q99741 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CDC6Q99741 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC6Q99741 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC6Q99741 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC6Q99741 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC6Q99741 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.57■■□□□ 1.04
CDC6Q99741 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC6Q99741 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC6Q99741 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC6Q99741 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC6Q99741 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDC6Q99741 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.56■■□□□ 1.04
CDC6Q99741 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.56■■□□□ 1.04
CDC6Q99741 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC6Q99741 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC6Q99741 BID-214ENST00000617586 542 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC6Q99741 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC6Q99741 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC6Q99741 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CDC6Q99741 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC6Q99741 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC6Q99741 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC6Q99741 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.55■■□□□ 1.04
CDC6Q99741 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.55■■□□□ 1.04
CDC6Q99741 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC6Q99741 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC6Q99741 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDC6Q99741 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.55■■□□□ 1.04
CDC6Q99741 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDC6Q99741 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC6Q99741 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.54■■□□□ 1.04
CDC6Q99741 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.54■■□□□ 1.04
CDC6Q99741 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.54■■□□□ 1.04
CDC6Q99741 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC6Q99741 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC6Q99741 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC6Q99741 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC6Q99741 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC6Q99741 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC6Q99741 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDC6Q99741 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC6Q99741 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC6Q99741 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC6Q99741 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC6Q99741 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC6Q99741 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC6Q99741 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms