Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.88■□□□□ 0.61
CITED4Q96RK1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CITED4Q96RK1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CITED4Q96RK1 SLC6A10P-202ENST00000431994 2058 ntBASIC18.88■□□□□ 0.61
CITED4Q96RK1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CITED4Q96RK1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CITED4Q96RK1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CITED4Q96RK1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CITED4Q96RK1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CITED4Q96RK1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.87■□□□□ 0.61
CITED4Q96RK1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.86■□□□□ 0.61
CITED4Q96RK1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CITED4Q96RK1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.86■□□□□ 0.61
CITED4Q96RK1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CITED4Q96RK1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.85■□□□□ 0.61
CITED4Q96RK1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 AC026310.3-201ENST00000625186 2373 ntBASIC18.84■□□□□ 0.61
CITED4Q96RK1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CITED4Q96RK1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CITED4Q96RK1 AC242852.2-201ENST00000615738 1807 ntBASIC18.84■□□□□ 0.61
CITED4Q96RK1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CITED4Q96RK1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CITED4Q96RK1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.83■□□□□ 0.6
CITED4Q96RK1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.6
CITED4Q96RK1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CITED4Q96RK1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CITED4Q96RK1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CITED4Q96RK1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CITED4Q96RK1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CITED4Q96RK1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CITED4Q96RK1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CITED4Q96RK1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms