Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.65■■□□□ 1.06
ATL1Q8WXF7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATL1Q8WXF7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 AC009086.3-201ENST00000623486 1008 ntBASIC21.64■■□□□ 1.05
ATL1Q8WXF7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATL1Q8WXF7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 AC241377.3-202ENST00000626088 1088 ntBASIC21.63■■□□□ 1.05
ATL1Q8WXF7 AC241585.3-202ENST00000628937 1088 ntBASIC21.63■■□□□ 1.05
ATL1Q8WXF7 AC245100.8-202ENST00000629247 1058 ntBASIC21.63■■□□□ 1.05
ATL1Q8WXF7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ATL1Q8WXF7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 C9orf163-202ENST00000624034 2573 ntBASIC21.62■■□□□ 1.05
ATL1Q8WXF7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ATL1Q8WXF7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATL1Q8WXF7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATL1Q8WXF7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.59■■□□□ 1.05
ATL1Q8WXF7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.58■■□□□ 1.05
ATL1Q8WXF7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATL1Q8WXF7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ATL1Q8WXF7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.58■■□□□ 1.04
ATL1Q8WXF7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.04
ATL1Q8WXF7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.57■■□□□ 1.04
ATL1Q8WXF7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.56■■□□□ 1.04
ATL1Q8WXF7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms