Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCNYL3P0C7X3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.33■■□□□ 1.01
CCNYL3P0C7X3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CCNYL3P0C7X3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCNYL3P0C7X3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CCNYL3P0C7X3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCNYL3P0C7X3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CCNYL3P0C7X3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCNYL3P0C7X3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 BX842568.3-201ENST00000418104 571 ntBASIC21.32■■□□□ 1
CCNYL3P0C7X3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.32■■□□□ 1
CCNYL3P0C7X3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CCNYL3P0C7X3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCNYL3P0C7X3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.32■■□□□ 1
CCNYL3P0C7X3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNYL3P0C7X3 AC012676.1-201ENST00000574705 1949 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNYL3P0C7X3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCNYL3P0C7X3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCNYL3P0C7X3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.31■■□□□ 1
CCNYL3P0C7X3 AC104564.3-201ENST00000582367 638 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.31■■□□□ 1
CCNYL3P0C7X3 pRNA.6-201ENST00000610482 90 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNYL3P0C7X3 pRNA.5-201ENST00000612139 90 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 MIR6821-201ENST00000617625 74 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 pRNA.11-201ENST00000618423 90 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 pRNA.13-201ENST00000619112 90 ntBASIC21.31■■□□□ 1
CCNYL3P0C7X3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNYL3P0C7X3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNYL3P0C7X3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNYL3P0C7X3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.3■■□□□ 1
CCNYL3P0C7X3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCNYL3P0C7X3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCNYL3P0C7X3 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.3■■□□□ 1
CCNYL3P0C7X3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNYL3P0C7X3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNYL3P0C7X3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNYL3P0C7X3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNYL3P0C7X3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.29■■□□□ 1
CCNYL3P0C7X3 AC097381.1-201ENST00000429019 1296 ntBASIC21.29■■□□□ 1
CCNYL3P0C7X3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.29■■□□□ 1
CCNYL3P0C7X3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL3P0C7X3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNYL3P0C7X3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNYL3P0C7X3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL3P0C7X3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.28■■□□□ 1
CCNYL3P0C7X3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms