Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSF1P09603 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.14■□□□□ 0.65
CSF1P09603 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.14■□□□□ 0.65
CSF1P09603 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CSF1P09603 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CSF1P09603 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.14■□□□□ 0.65
CSF1P09603 AC090877.2-201ENST00000558441 1738 ntBASIC19.14■□□□□ 0.65
CSF1P09603 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSF1P09603 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.13■□□□□ 0.65
CSF1P09603 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSF1P09603 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSF1P09603 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.13■□□□□ 0.65
CSF1P09603 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.13■□□□□ 0.65
CSF1P09603 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.13■□□□□ 0.65
CSF1P09603 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
CSF1P09603 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSF1P09603 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1P09603 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSF1P09603 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.12■□□□□ 0.65
CSF1P09603 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSF1P09603 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.12■□□□□ 0.65
CSF1P09603 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSF1P09603 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSF1P09603 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CSF1P09603 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.11■□□□□ 0.65
CSF1P09603 SPCS2P3-201ENST00000500401 656 ntBASIC19.11■□□□□ 0.65
CSF1P09603 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSF1P09603 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CSF1P09603 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CSF1P09603 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSF1P09603 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.1■□□□□ 0.65
CSF1P09603 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.1■□□□□ 0.65
CSF1P09603 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.1■□□□□ 0.65
CSF1P09603 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CSF1P09603 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.1■□□□□ 0.65
CSF1P09603 AC009299.2-201ENST00000482477 511 ntBASIC19.1■□□□□ 0.65
CSF1P09603 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.1■□□□□ 0.65
CSF1P09603 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.1■□□□□ 0.65
CSF1P09603 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSF1P09603 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CSF1P09603 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.09■□□□□ 0.65
CSF1P09603 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSF1P09603 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.09■□□□□ 0.65
CSF1P09603 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
CSF1P09603 AL022069.1-201ENST00000568025 1636 ntBASIC19.09■□□□□ 0.65
CSF1P09603 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSF1P09603 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.08■□□□□ 0.65
CSF1P09603 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSF1P09603 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSF1P09603 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.08■□□□□ 0.65
CSF1P09603 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.08■□□□□ 0.64
CSF1P09603 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.08■□□□□ 0.64
CSF1P09603 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.08■□□□□ 0.64
CSF1P09603 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.08■□□□□ 0.64
CSF1P09603 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.08■□□□□ 0.64
CSF1P09603 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 AC139530.1-201ENST00000575312 1977 ntBASIC19.08■□□□□ 0.64
CSF1P09603 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms