Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
MBD4O95243 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.65■■□□□ 1.86
MBD4O95243 AC092068.2-201ENST00000590491 1708 ntBASIC26.65■■□□□ 1.86
MBD4O95243 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 AC099791.1-201ENST00000416440 715 ntBASIC26.65■■□□□ 1.86
MBD4O95243 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 AC091305.1-201ENST00000479476 895 ntBASIC26.65■■□□□ 1.86
MBD4O95243 AC027682.1-201ENST00000562846 899 ntBASIC26.65■■□□□ 1.86
MBD4O95243 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
MBD4O95243 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
MBD4O95243 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.65■■□□□ 1.86
MBD4O95243 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
MBD4O95243 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MBD4O95243 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.64■■□□□ 1.86
MBD4O95243 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MBD4O95243 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.64■■□□□ 1.86
MBD4O95243 BX842568.3-201ENST00000418104 571 ntBASIC26.64■■□□□ 1.86
MBD4O95243 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MBD4O95243 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.64■■□□□ 1.86
MBD4O95243 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MBD4O95243 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
MBD4O95243 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MBD4O95243 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MBD4O95243 AC010525.1-201ENST00000585559 441 ntBASIC26.63■■□□□ 1.85
MBD4O95243 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.63■■□□□ 1.85
MBD4O95243 AC233992.3-201ENST00000607491 485 ntBASIC26.63■■□□□ 1.85
MBD4O95243 CA15P2-201ENST00000611168 834 ntBASIC26.63■■□□□ 1.85
MBD4O95243 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MBD4O95243 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
MBD4O95243 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
MBD4O95243 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.62■■□□□ 1.85
MBD4O95243 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 ZNRF2P3-201ENST00000424200 374 ntBASIC26.62■■□□□ 1.85
MBD4O95243 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.62■■□□□ 1.85
MBD4O95243 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
MBD4O95243 RASA4CP-201ENST00000424092 1398 ntBASIC26.61■■□□□ 1.85
MBD4O95243 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.61■■□□□ 1.85
MBD4O95243 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.61■■□□□ 1.85
MBD4O95243 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 AC105265.2-201ENST00000467189 838 ntBASIC26.61■■□□□ 1.85
MBD4O95243 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.61■■□□□ 1.85
MBD4O95243 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MBD4O95243 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.61■■□□□ 1.85
MBD4O95243 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
MBD4O95243 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MBD4O95243 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
MBD4O95243 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
MBD4O95243 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
MBD4O95243 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.6■■□□□ 1.85
MBD4O95243 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MBD4O95243 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.6■■□□□ 1.85
MBD4O95243 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.59■■□□□ 1.85
MBD4O95243 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 AC004687.1-201ENST00000579003 1625 ntBASIC26.59■■□□□ 1.85
MBD4O95243 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.59■■□□□ 1.85
MBD4O95243 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.59■■□□□ 1.85
MBD4O95243 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
MBD4O95243 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MBD4O95243 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
MBD4O95243 OR2I1P-207ENST00000453522 948 ntBASIC26.58■■□□□ 1.85
MBD4O95243 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.58■■□□□ 1.85
MBD4O95243 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
MBD4O95243 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
MBD4O95243 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
MBD4O95243 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
MBD4O95243 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.57■■□□□ 1.84
MBD4O95243 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.57■■□□□ 1.84
MBD4O95243 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
MBD4O95243 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.57■■□□□ 1.84
MBD4O95243 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MBD4O95243 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MBD4O95243 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.56■■□□□ 1.84
MBD4O95243 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.56■■□□□ 1.84
MBD4O95243 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MBD4O95243 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
MBD4O95243 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
MBD4O95243 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms