Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.66■□□□□ 0.9
HCN1O60741 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.66■□□□□ 0.9
HCN1O60741 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.66■□□□□ 0.9
HCN1O60741 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.65■□□□□ 0.9
HCN1O60741 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HCN1O60741 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.65■□□□□ 0.9
HCN1O60741 AC133561.4-201ENST00000566112 224 ntBASIC20.65■□□□□ 0.9
HCN1O60741 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN1O60741 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.65■□□□□ 0.9
HCN1O60741 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HCN1O60741 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCN1O60741 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCN1O60741 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCN1O60741 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.64■□□□□ 0.9
HCN1O60741 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCN1O60741 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HCN1O60741 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.64■□□□□ 0.89
HCN1O60741 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.64■□□□□ 0.89
HCN1O60741 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 AC092068.2-201ENST00000590491 1708 ntBASIC20.64■□□□□ 0.89
HCN1O60741 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN1O60741 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HCN1O60741 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HCN1O60741 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.63■□□□□ 0.89
HCN1O60741 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.63■□□□□ 0.89
HCN1O60741 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HCN1O60741 C9orf163-202ENST00000624034 2573 ntBASIC20.63■□□□□ 0.89
HCN1O60741 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN1O60741 AL117328.2-201ENST00000624617 1940 ntBASIC20.63■□□□□ 0.89
HCN1O60741 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HCN1O60741 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.62■□□□□ 0.89
HCN1O60741 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.62■□□□□ 0.89
HCN1O60741 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
HCN1O60741 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HCN1O60741 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.62■□□□□ 0.89
HCN1O60741 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.62■□□□□ 0.89
HCN1O60741 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN1O60741 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HCN1O60741 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.61■□□□□ 0.89
HCN1O60741 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCN1O60741 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCN1O60741 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HCN1O60741 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HCN1O60741 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HCN1O60741 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCN1O60741 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCN1O60741 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HCN1O60741 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HCN1O60741 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCN1O60741 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCN1O60741 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCN1O60741 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCN1O60741 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HCN1O60741 AC092171.4-201ENST00000609130 632 ntBASIC20.6■□□□□ 0.89
HCN1O60741 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCN1O60741 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCN1O60741 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HCN1O60741 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HCN1O60741 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.59■□□□□ 0.89
HCN1O60741 DUX4L19-201ENST00000557448 1267 ntBASIC20.59■□□□□ 0.89
HCN1O60741 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
HCN1O60741 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HCN1O60741 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCN1O60741 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.58■□□□□ 0.89
HCN1O60741 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HCN1O60741 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HCN1O60741 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.58■□□□□ 0.89
HCN1O60741 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms