Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SLC28A1O00337 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SLC28A1O00337 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC28A1O00337 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC28A1O00337 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC28A1O00337 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC28A1O00337 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC28A1O00337 LINC01529-204ENST00000636474 1715 ntBASIC21.38■■□□□ 1.01
SLC28A1O00337 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC28A1O00337 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC28A1O00337 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC28A1O00337 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC28A1O00337 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC28A1O00337 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SLC28A1O00337 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC28A1O00337 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC28A1O00337 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
SLC28A1O00337 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SLC28A1O00337 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC28A1O00337 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC28A1O00337 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A1O00337 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC28A1O00337 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A1O00337 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC28A1O00337 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
SLC28A1O00337 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC28A1O00337 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SLC28A1O00337 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC28A1O00337 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A1O00337 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC28A1O00337 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SLC28A1O00337 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
SLC28A1O00337 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SLC28A1O00337 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC28A1O00337 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC28A1O00337 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC28A1O00337 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLC28A1O00337 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC28A1O00337 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC28A1O00337 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC28A1O00337 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SLC28A1O00337 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC28A1O00337 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC28A1O00337 AC092028.1-203ENST00000608262 953 ntBASIC21.34■■□□□ 1.01
SLC28A1O00337 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC28A1O00337 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 LINC00565-201ENST00000562710 2331 ntBASIC21.34■■□□□ 1.01
SLC28A1O00337 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC28A1O00337 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A1O00337 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.33■■□□□ 1.01
SLC28A1O00337 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A1O00337 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A1O00337 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLC28A1O00337 KRT125P-201ENST00000546827 989 ntBASIC21.33■■□□□ 1.01
SLC28A1O00337 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC28A1O00337 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC28A1O00337 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SLC28A1O00337 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SLC28A1O00337 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.32■■□□□ 1
SLC28A1O00337 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SLC28A1O00337 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SLC28A1O00337 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC28A1O00337 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.32■■□□□ 1
SLC28A1O00337 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
SLC28A1O00337 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A1O00337 Z92544.1-202ENST00000571933 1220 ntBASIC21.32■■□□□ 1
SLC28A1O00337 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC28A1O00337 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC28A1O00337 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms