Protein–RNA interactions for Protein: Q3B7S5

SMIM21, Small integral membrane protein 21, humanhuman

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21Q3B7S5 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 BCYRN1-201ENST00000418539 200 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC005077.3-201ENST00000449614 213 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 TNRC18P1-201ENST00000502875 3650 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PRSS3P1-201ENST00000503996 742 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 RN7SKP155-201ENST00000516031 288 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 MT3-203ENST00000565838 421 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AL513497.1-201ENST00000624273 2083 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 DNM1P41-201ENST00000623634 3350 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC019294.4-201ENST00000561777 2905 ntBASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SMIM21Q3B7S5 PCDHA6-201ENST00000378126 3267 ntBASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM21Q3B7S5 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms